| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3386 |
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| Symbol | |
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| ID | 5748971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3723571 |
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| End bp | 3724518 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298490 |
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| Product | folate-binding protein YgfZ |
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| Protein accession | YP_001564409 |
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| Protein GI | 160898827 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00306542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.164661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CTTTACTGAA CGGCATTGCT TCCGTTTCCC ATCTCGGCGT GATACGCGCC
CTCGGCGAAG ACGCCGCCCA GTTCCTGCAT GGACAGCTGA CCAACGACTT CGCGCTGCTG
GATCTGCAGC ATGCGCGTCT GGCGGCGTTC TGCACGGCCA AGGGCCGCAT GCTGGCCAGC
TTCATCGGCT TCAAGCGCAG CAAGGACGAG ATCTTGCTGC TGTGCGACCG CAGCCTGCTG
GCGCCCACGC TCAAGCGCTT GTCCATGTTC GTGCTGCGCG CCAAGTGCAA GCTCAGCGAC
GCCACGGCCG AATTCACGCT GCACGGGCTG GCTGGCGGTG CCGCCGCGCA GGCCCTGGGC
CCGGCAGCCG TGCCCTGGAC CAAGACCGAT GACGGCGACG CCAGCCTGAT CGCCCTGTAC
CCGGCCGCCG GCCAGCCGCG CGCCCTGCGC GTGGCGCCCG TGGGCACGCC CCTGCCCGAA
GGCCCTGCAC TCAGCGAGGC CGACTGGCTC TGGAGCGAAG TCGCCAGCGG CATTGCCACG
CTGTCGGCGC CTGTGGTGGA TGCCTTTGTG CCGCAGATGC TCAACTACGA ATCGGTGGAA
GGCGTGAATT TCAAGAAAGG CTGCTACCCA GGCCAGGAGG TGGTGGCCCG CAGCCAGTTC
CGGGGCACGC TCAAGCGCCG CGCCTACCTT GCCCATGCAC AGCAGCCGCT GGCCACCGGC
ATGGAGGTCT TCACGCCCGA GGACCTGGAG CAGGCCACCG GCACCGTGGT CCAGGCCGCC
CCGGCGCCTG GCGGCGGCTG GGACGCCATC GTCTCCATTC AGACCAGCTC GGCCGACCAG
CCCCTGCTGG CCCACGCCGC ACTGGGCGAA GGCCAGCGCG CCGATGCCGC ACAGGCCGTG
GCGCTGCAGC TCAAGCCCCT GCCCTACGCG TTGCGCGAGG ACATTTGA
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| Protein sequence | MTQPLLNGIA SVSHLGVIRA LGEDAAQFLH GQLTNDFALL DLQHARLAAF CTAKGRMLAS
FIGFKRSKDE ILLLCDRSLL APTLKRLSMF VLRAKCKLSD ATAEFTLHGL AGGAAAQALG
PAAVPWTKTD DGDASLIALY PAAGQPRALR VAPVGTPLPE GPALSEADWL WSEVASGIAT
LSAPVVDAFV PQMLNYESVE GVNFKKGCYP GQEVVARSQF RGTLKRRAYL AHAQQPLATG
MEVFTPEDLE QATGTVVQAA PAPGGGWDAI VSIQTSSADQ PLLAHAALGE GQRADAAQAV
ALQLKPLPYA LREDI
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