| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3352 |
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| Symbol | |
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| ID | 5748937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3678779 |
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| End bp | 3680902 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298456 |
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| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
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| Protein accession | YP_001564375 |
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| Protein GI | 160898793 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.32899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.291074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC ACGTGCTTTC CTCCACGCTG CTGGCCGCCG GCCTGGCGCT GGCCCTGCCG
GGCGCCGCTC TGGCGCAGGC AGGCCTGCCA AGCAAAGGCT CGCCCGAGCA CATACGCGCC
GTCACCTCGC GCATCGACTC GCAGAGCATC CGCGACAACG CGCGCAGTTC CAAGGACTGG
CCCAGCTACG GCATGGACTA CAGCGAGACG CGCTTTTCCA AACTCAGGCA GCTGGACACG
GCCAATGTGA AGCGGCTGGG CCTGGTCTGG TCGTATGACC TGGAATCCAC GCGCGGCGTG
GAGTCCACGC CCGTGGTGGT CGACGGAATC ATGTACGTCA CGGCCAGCTG GAGCGTGGTG
CATGCGGTGG ACGTGCGCAC CGGCAAGCGC CTGTGGAGCT ACGACCCCGG CGTGGACCGC
GCCAACGGCT TCAAGGGCTG CTGCGACGTG GTCAACCGCG GCGTGGCGGT CTACAAGGGC
AAGGTGTATG TGGGAGCCTT CGATGGCCGC CTGGTGGCGC TGGACGCGGC CACGGGCCAG
AAGGTCTGGG AGCAGGACAC CATCATCGAC CGCGCCTACT CGTACACCAT CACGGGCGCG
CCGCGCGTCA TCAAGGGCAA GGTGCTGATC GGCAACGGCG GCGCCGAGTA CGGCGTGCGC
GGCTATGTCA CGGCCTATGA CGCCGAGACC GGCGCGCAGC AATGGCGCTG GTTCACCGTG
CCAGGCGATC CGTCCAAGCC CTTCGAGAAC GAGGCCATGG CCCGCGCCGC CAAGACCTGG
GACCCGGCCG GCAAGTGGTG GGAGGCCGGT GGCGGCGGCA CGGCCTGGGA CACCATGGCC
TATGACCCCG AGCTCAACCT CATGTACATC GGCACGGGCA ACGGCTCGCC CTGGGCGCAA
GCCAAGCGCA GCCCGGCCGG TGGCGACAAC CTGTACCTGG CCAGCATCGT GGCGCTGAAC
CCCGATACGG GCGAGTACGT CTGGCATTAC CAGGAAACGC CGGGCGACAG CTGGGACTTC
ACCTCCACCC AGCCCATGGT GCTGGCCGAC ATCAAGATCG GCGGCAAGCC GCGCAAGGTC
ATCCTGCATG CGCCCAAGAA TGGCTTCTTC TTCGTCATCG ACCGCACCAA CGGCCAGTTC
ATCTCGGCCA AGAACTTCGT CGATGTGAAC TGGGCCAGCG GCTACGACGC CAAGGGCCGC
CCCATCGAGA CGCCGATTGC GCGCAGCGGC GACCGCGCGC GCGACGTGAT CCCCAGCCCC
TTCGGCGCGC ACAACTGGCA TTCCATGTCC TACAGCCCCG ATACGGGCCT GGCCTACCTG
CCGGCCCAGC ATGTGCCGCT GACCCTGCAG GACAACAAGA ACTGGAAGTT CAACGGCGGC
TCCCTGCCCG AGCCGCACAG CAACATCGGC TGGAACACGG CCACGCTGAT CAACATGGAG
CCGCCCAAGA GCACGCCCTT CGGCCGCCTG ATCGCCTGGG ACCCGGTGGC GCAGAAGGAG
CGCTGGCGTG TGGAGCATGC CTCGCCCTGG AACGGCGGCA CGCTGGCAAC GGCGGGCAAC
CTGGTGTTCC AGGGCACGGC CGACGGCCGC TTCGTGGCCT ATGACGCGCG CAATGGCAAG
AAGCTCTGGG AAAAGCCCAC GGGCACGGGC GTGGTGGCCG CACCCATCAC CTATGAGGTC
GATGGGCGGC AGTACGTCTC CATCGCCGTG GGCTGGGGCG GCGTCTACGG CCTGGCCGCG
CGCCACACCG AGCGCAAGGG CCCGGGCACG GTCTACACCT TCGCGCTGGA CGGCAAGGCC
GAGGCGCCTG CCTTCGTCGC CTACCAGCAG GGCAAGCTGC TGCAGGGCGT GCCCTACGAC
AAGAGCCTTG TGGCCGAAGG CACGGCCCTG TATGTCAGCA ACTGCGCCTT CTGCCACGGC
GTGCCCGGCG TGGACCGGGG CGGCAACCTG CCCAACCTGG GCTACCTGGA CCCGGCCTAT
ATCGAGCACC TGGACAAGTT CATCTTCAAG GGCCCGGCCA TGTCGCGCGG CATGCCCGAC
TTCACGGGCA AGCTGAGCAT GGAAGACGTG GAAAAGATCA AGGCCTTCAT CCAGGGCACG
GCCGACGCGG TGCGGCCCAA GTAG
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| Protein sequence | MKTHVLSSTL LAAGLALALP GAALAQAGLP SKGSPEHIRA VTSRIDSQSI RDNARSSKDW
PSYGMDYSET RFSKLRQLDT ANVKRLGLVW SYDLESTRGV ESTPVVVDGI MYVTASWSVV
HAVDVRTGKR LWSYDPGVDR ANGFKGCCDV VNRGVAVYKG KVYVGAFDGR LVALDAATGQ
KVWEQDTIID RAYSYTITGA PRVIKGKVLI GNGGAEYGVR GYVTAYDAET GAQQWRWFTV
PGDPSKPFEN EAMARAAKTW DPAGKWWEAG GGGTAWDTMA YDPELNLMYI GTGNGSPWAQ
AKRSPAGGDN LYLASIVALN PDTGEYVWHY QETPGDSWDF TSTQPMVLAD IKIGGKPRKV
ILHAPKNGFF FVIDRTNGQF ISAKNFVDVN WASGYDAKGR PIETPIARSG DRARDVIPSP
FGAHNWHSMS YSPDTGLAYL PAQHVPLTLQ DNKNWKFNGG SLPEPHSNIG WNTATLINME
PPKSTPFGRL IAWDPVAQKE RWRVEHASPW NGGTLATAGN LVFQGTADGR FVAYDARNGK
KLWEKPTGTG VVAAPITYEV DGRQYVSIAV GWGGVYGLAA RHTERKGPGT VYTFALDGKA
EAPAFVAYQQ GKLLQGVPYD KSLVAEGTAL YVSNCAFCHG VPGVDRGGNL PNLGYLDPAY
IEHLDKFIFK GPAMSRGMPD FTGKLSMEDV EKIKAFIQGT ADAVRPK
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