Gene Daci_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3350 
Symbol 
ID5748935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3676230 
End bp3677738 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content70% 
IMG OID641298454 
Productaldehyde dehydrogenase 
Protein accessionYP_001564373 
Protein GI160898791 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.222349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.605531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA GCGACATCCA GCACCAGATC ACCGAGCGCG CCAGCGCCTT CCTCAACCGG 
GGCACGCATG ACCTCTTCAT CGACGGCCAA TGGGTGGCGG CCCGGACCGG CCAGCGCCTG
TCAACCGTCA ACCCGGCCAC CGAGGCCGTG ATCGCCGAAG TCGCCAGCGC CGGCCCGGCC
GACGTGGACT TGGCCGTGCG CGCCGCGCAC CGCGCCCTGC ACCTGGGCCC CTGGGGCCGC
ATGCGCCCCG TGGAGCGCGA GCGCCTGATG CTGCGCCTGG CCGACCTCAT GGAGACCCAT
GCCCAGGCCC TGGCCGAGGT CGAATCGCTG GACAACGGCA AGTCCGCCGC CATTGCGCGC
GCCGTGGACA TCGCGATGGC CATCGACTCC ATCCGCTACA TGGCCGGCTG GGCCACCAAG
ATCGAAGGCA TGACGCACGA GCACTCCGTG CCCTTCGCGC CCGAGGCCCA GATGTTCACC
TACACCCGGC GCGAGCCCGT GGGCGTGGTC GCCGCCGTCG TGCCCTGGAA CTTCCCCCTG
CTCATGGCCA CCTGGAAGCT GGCGCCCGCG CTGGCTGCCG GCTGCACCCT GGTGCTCAAG
CCCGCCGAGC AGACGCCGCT GACCGCGCTG ATGCTGGCCG AGCTGATCCA GGAAGCGGGC
TTTCCGCCCG GCGTGTTCAA CGTGGTCACG GGCGACGGCC CCGGCACGGG TGCGCCCCTG
GTCTCGCACC CGCTGGTCAA CAAGGTCAGC TTCACGGGCT CGACCGAGGT GGGCAAGCTC
ATCGGCCATG CCTGCATGGA CAACATGACG CGCATCACGC TGGAGCTGGG CGGCAAGTCC
CCCGTCATCG TGCTGGACGA CTGCGATCCC GCCACGGCGG CGGCGGGTGC GGCCAATGCC
ATCTTCTTCA ACCACGGCCA GGTCTGCTGC GCGGGCTCGC GCCTGTACGT GCACAAGAGC
ATGTTCGACC GCGTGGTGGC CGACGTGGCC GACCAGGCCG CCCGGCTTAC CCTGGGCCAT
GGCCTGGACC CCAGCGCGCA GATGGGCCCG CTGGTCTCGC AGGAACAGAT GGAGCGCGTC
TGCAGCTACA TCGACATAGG CCGCAGCCAG GGCGCCGAGG TGGTGACGGG CGGCGCCCGC
GCAGGCCAGC GCGGCTACTT CGTGCAGCCC ACGGTGATGA CCGGCGTGCA GCACGACCAC
CGCGTGGCAC GCGAGGAAAT CTTCGGCCCC GTGCTCGTGG CCATGCCCTA TGACGACCTC
GACGAAGTCG CCGCCTGGGC CAACGACACG CCCTACGGCC TGGGCGCCAG CATCTGGTCC
AACAACCTGT CCAAGGTCCA CCGGCTGATC CCCAAGATCC AGTCCGGCAC GGTCTGGGTC
AACTGCCACA GCACCCTGGA CCCGGGCATG CCCTTCGGCG GCTACAAGCA GTCCGGCATG
GGCCGCGATA TGGGCCGCAC CGCGCTGGAT GCCTACCTGG AGACCAAGTC GGTGTTCATC
AATCTGTGA
 
Protein sequence
MNLSDIQHQI TERASAFLNR GTHDLFIDGQ WVAARTGQRL STVNPATEAV IAEVASAGPA 
DVDLAVRAAH RALHLGPWGR MRPVERERLM LRLADLMETH AQALAEVESL DNGKSAAIAR
AVDIAMAIDS IRYMAGWATK IEGMTHEHSV PFAPEAQMFT YTRREPVGVV AAVVPWNFPL
LMATWKLAPA LAAGCTLVLK PAEQTPLTAL MLAELIQEAG FPPGVFNVVT GDGPGTGAPL
VSHPLVNKVS FTGSTEVGKL IGHACMDNMT RITLELGGKS PVIVLDDCDP ATAAAGAANA
IFFNHGQVCC AGSRLYVHKS MFDRVVADVA DQAARLTLGH GLDPSAQMGP LVSQEQMERV
CSYIDIGRSQ GAEVVTGGAR AGQRGYFVQP TVMTGVQHDH RVAREEIFGP VLVAMPYDDL
DEVAAWANDT PYGLGASIWS NNLSKVHRLI PKIQSGTVWV NCHSTLDPGM PFGGYKQSGM
GRDMGRTALD AYLETKSVFI NL