| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3306 |
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| Symbol | |
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| ID | 5748891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3624999 |
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| End bp | 3626636 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298410 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001564329 |
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| Protein GI | 160898747 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.135648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0145757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTC TGATGCAAAG CCAACCACTG TTGATCTCGT CGCTGATCGA CTTCGCCGAC
CGCCACCATG GCGATGCGGA GATCGTCTCG CGCAGGGTGG AGGGCGATAT CCATCGCTAT
ACGTACCGCG ACCTGGCACG GCGCTCGCGC CAGCTGGCGA ACACGCTGGA CGGCCTGGGC
TTGCAGCCCG GCGACCGCGT GGCCTCGCTG GCCTGGAACG GCTACCGCCA CATGGAGATG
TACTTCGGCG TCAGCGGCTC GGGCCGCGTG CTGCACACGG TCAACCCGCG CCTGCACCCC
GACCAGGTGG CGTGGATCAT CAACCACGCG GAAGACCGCG TCATGTGCTT TGACCTGACC
TTCCTTCCCA TCATCCAGGC CGTGCATGCC AAGTGCCCCA CGGTGCGCCA GTGGGTGGCG
CTGTGCGATG CGGATCGCCT GCCCGCCGAC AGCGGCATTC CGGGCCTGGT CAGCTACGAG
GCCTGGATTG CCGGCCAGCC CGACCAGTAC CAGTGGCCCG AATTCGACGA GAACACGGCC
TCCAGCATGT GCTACACCAG CGGCACCACG GGCAACCCGA AGGCCGTGCT GTACAGCCAC
CGTTCCACCA CGCTGCACGC CTACGCGGCC GCGCTGCCCG ATGTGATGTG CATATCGGCG
CGCGACTCGG TGCTGCCTGT CGTGCCCATG TTCCACGTCA ACGCCTGGGG CATTCCCTAC
TCGGCCGCGC TCACGGGCTG CAAGCTGGTG TTCCCGGGCC CGGCGCTGGA CGGCAAGTCG
CTGTACGAGC TGATCGAGGC CGAGGGCGTC ACCTACGCGG CTGGCGTGCC CACGGTCTGG
CAGATGCTGC TGGGCCACAT CAGGCCGGGC GGCCTGCGGT TTTCCACGCT CAAGCGCACG
GTGATCGGCG GCTCCGCCTG CCCGCCGGCC ATGATCACGG CCTTCCAGGA CGAGTTCGGC
GTGGAGGTGC TGCATGCCTG GGGAATGACC GAGATGAGCC CGCTGGGCAC GCTGTGCACG
CTCAAGAACA AGCAGCTGCA GCTGCCCAAG GACGAGCAGA TGAAGATCCT GCAAAAGCAG
GGCCGCGCCA TCTACGGCGT GGATATGCGC ATCGTCGACA GCGACGGCAC CGACCAGCCC
TGGGACGGCA AGAGCTATGG CGACCTGCTG GTGCGCGGCC CCTGGATCGT GGACAGCTAC
TTCAAGGGCG AGAGCCCGCT GGTCAAGGAC GCGCAGGGCC GCGGCTGGTT CCCCACGGGC
GACGTGGCCA CCATCGACCC GGACGGCTTC ATGCAGATCA CCGACCGCAG CAAGGACGTG
ATCAAGTCCG GCGGCGAGTG GATCAGCTCC ATCGACATCG AGAACATCGC CATGGCCCAT
CCGGCCGTGG CCATGGCCGC CTGCATCGGC ATGCCGCATC CCAAGTGGGA CGAGCGCCCC
ATCGTCGCCG TGGCGAAGAA GCCCGGCGCC GAGGTCACGC GCGAGGAACT GCTCAAGTTC
TACGAGGGCA AGACCGCCAA GTGGCAGATC CCCGACGACG TGGTCTTCGT CGATGCCATC
CCGCTGGGCG CCACCGGAAA AATGCTCAAG ACCCGGCTGC GCGAGCAGCT GGCCGGCTAC
CGGCTGCCGG GGCTTTGA
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| Protein sequence | MLGLMQSQPL LISSLIDFAD RHHGDAEIVS RRVEGDIHRY TYRDLARRSR QLANTLDGLG
LQPGDRVASL AWNGYRHMEM YFGVSGSGRV LHTVNPRLHP DQVAWIINHA EDRVMCFDLT
FLPIIQAVHA KCPTVRQWVA LCDADRLPAD SGIPGLVSYE AWIAGQPDQY QWPEFDENTA
SSMCYTSGTT GNPKAVLYSH RSTTLHAYAA ALPDVMCISA RDSVLPVVPM FHVNAWGIPY
SAALTGCKLV FPGPALDGKS LYELIEAEGV TYAAGVPTVW QMLLGHIRPG GLRFSTLKRT
VIGGSACPPA MITAFQDEFG VEVLHAWGMT EMSPLGTLCT LKNKQLQLPK DEQMKILQKQ
GRAIYGVDMR IVDSDGTDQP WDGKSYGDLL VRGPWIVDSY FKGESPLVKD AQGRGWFPTG
DVATIDPDGF MQITDRSKDV IKSGGEWISS IDIENIAMAH PAVAMAACIG MPHPKWDERP
IVAVAKKPGA EVTREELLKF YEGKTAKWQI PDDVVFVDAI PLGATGKMLK TRLREQLAGY
RLPGL
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