Gene Daci_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3296 
Symbol 
ID5748881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3612912 
End bp3613676 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID641298400 
Productankyrin 
Protein accessionYP_001564319 
Protein GI160898737 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.172473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCATG CTGTTTCCCG ATCCGGCGCG CAGGGCCGGC ACGCGGCGAT TCTGACGGCC 
TGCCTTGCGG CGGGACTGGC GGATGTCCAG GCGCAGGAGG CCCAGGCCGT TGCCGCAGCC
GCCGAGGGCC GCGACGCGGC CAAGGCGCAG GAGGGTGTGG TGAACCGCCC CGAATTCGGC
CCCGCGCTGC TGGCGGCCGC CCAGGCGGGC GAAGCGCTGC AGGTGCGCGA CTGGCTCAAG
CGCGGCGCGC CGGTGGATGT GCGTGATCCG CAGGGCAACA CGCCGCTGCT GCTGGCCGTG
CGTGGCAACC ATGTCGAGGT CGCGCGCTCC TTGCTGGTCC ACGGGGCCAA TCCCAATCTC
AAGAACGACC TGCAGGACAG CGCCTATCTG CTGGCCGGTG CCCTGGGCCG GCTGGAAATC
CTGCGCATGA CACTGTCCTA TGGTGCGGAC CTGCAAAGCG TCAACCGCTA CGGCGGCACG
GCGCTGATCC CTGCCTGCGA GCGCGGCCAC GTCGATACCG TGCAGGCCTT GCTGGCTGCC
GGGGTGCGGG CCGACCATGT GAACCGGCTG GGCTGGACCT GCCTGCTCGA AGCCGTTTTG
CTGGGCGATG GTGGCCCGCG CTACCAGGAC ATCGTGCGCC AGCTGATCAC GGCGAAGGCG
GACCTCAGCC TGCCCGACAA GGACGGCGTC ACGGCCCTGG CCCACGCCCG CCAGCGCAGC
CAGCATGAGG TGGAGCGGCT GCTGCAGGAG GCGGGAGCGC GCTGA
 
Protein sequence
MHHAVSRSGA QGRHAAILTA CLAAGLADVQ AQEAQAVAAA AEGRDAAKAQ EGVVNRPEFG 
PALLAAAQAG EALQVRDWLK RGAPVDVRDP QGNTPLLLAV RGNHVEVARS LLVHGANPNL
KNDLQDSAYL LAGALGRLEI LRMTLSYGAD LQSVNRYGGT ALIPACERGH VDTVQALLAA
GVRADHVNRL GWTCLLEAVL LGDGGPRYQD IVRQLITAKA DLSLPDKDGV TALAHARQRS
QHEVERLLQE AGAR