Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3293 |
Symbol | |
ID | 5748878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3609858 |
End bp | 3611054 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641298397 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001564316 |
Protein GI | 160898734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.204133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAGCA CATGCCCTGT GCGCGGACAG CCGGCCGGCA GTCCCACGGG CATGGGCGCA CTTGACCACC AGATGCACAT GTCCGTTCTA CAAGCTTCTT CCCGCATCGC CATTCTGGGC GGCGGCCTCA TGGGCCGGCT GCTGGCATTG GCGCTGGCCC GTCGCGGCCA CGGCATTGCC GTATACGACG CCCACGGCCC CGAAGGCGAT GGCGCCGCGG CCCGCGTGGC AGCCGCCATG CTCGCGCCCC TGGCCGAATC GGCCATCACC GAGCCCGGCG TGGTGCGCAT GGGCCAGCAC GGCCTGACGC GCTGGCCCGA ACTGCTGGCC CAGCTCGATG CGCCCGTGTT CTTCCAGCAA AACGGCACCC TCATCCTCTG GCACCGCCAG GACGCGGGCG ATGCCCAGCG CTTCTTCGGC CTGCTGGAGA AAAACCGCCG CATCAACCCC AGCCTTCCCG CGCTGCAGCC GCTGGCCGAC CAGGCCCTGC ACGACTGCGA GCCCGCGCTT GAGCGGCGCT TTGCCCAGGC CATGTACCTG CAGGGCGAGG GCCAATTGGA CAACCGCCAG CTGCTGGCCT CACTCCACGC CACGCTGACC CGCCTGGGCG TGGAGCAGCA CTGGAACCAG CCGCGCGAGC TGGCCGACTT CCGTCCCGGC ACGCCGGGCC AGCCCGACTG GGTGCTGGAC TGCCGGGGCC TTGGCGCACG CGGCCAGTGG CCTGCGCTGC GCGGCGTGCG CGGCGAGGTG GTGCGCATCC ACGCGCCCGA GGTCACGCTG CAGCGGCCCA CGCGCCTGAT CCATCCGCGC TACCCGATCT ACATTGCGCC CAAGGAGGAC CACCTCTTCG TCATCGGCGC CACCGAGATC GAGTCCGACG ACATGTCGCC GGCCAGCGTG CGCTCCACGC TGGAGCTGCT GAGCGCCGCC TACACCGTGC ATCCGGGTTT TGCCGAAGGC CGCATCGTCG AGATCGCCAC CCAATGCCGC CCCACCCTGC CCGACAATCT GCCGGCCGTG CGCTGGAGCG CGCCGCGCGT GATGGAGGTC AACGGCCTGT ACCGCCATGG CTTCATGATC GCGCCGGCCA TGCTGGACGT GGTGCTGGAG CTGCTCGACA GCGGCGATTC CGAACTGGCC CGCCGCTTCG ATGTTGCCGT CGAGCATGCG CCATCGCAGC ACAAGGCAGC CGCCTGA
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Protein sequence | MSSTCPVRGQ PAGSPTGMGA LDHQMHMSVL QASSRIAILG GGLMGRLLAL ALARRGHGIA VYDAHGPEGD GAAARVAAAM LAPLAESAIT EPGVVRMGQH GLTRWPELLA QLDAPVFFQQ NGTLILWHRQ DAGDAQRFFG LLEKNRRINP SLPALQPLAD QALHDCEPAL ERRFAQAMYL QGEGQLDNRQ LLASLHATLT RLGVEQHWNQ PRELADFRPG TPGQPDWVLD CRGLGARGQW PALRGVRGEV VRIHAPEVTL QRPTRLIHPR YPIYIAPKED HLFVIGATEI ESDDMSPASV RSTLELLSAA YTVHPGFAEG RIVEIATQCR PTLPDNLPAV RWSAPRVMEV NGLYRHGFMI APAMLDVVLE LLDSGDSELA RRFDVAVEHA PSQHKAAA
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