Gene Daci_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3235 
Symbol 
ID5748819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3544804 
End bp3545268 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID641298338 
Producthypothetical protein 
Protein accessionYP_001564258 
Protein GI160898676 
COG category[S] Function unknown 
COG ID[COG5556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00164083 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAGGC TCGATGAGGC GGTCAAGCGC TTCATTGTGC AAGCGCTCGC CTGCTACGAC 
ACGCCGTCTC AGGTGGCTGA GGCGGTCAAG GAGGAATTCG GCCTGGTGCT GGACCGCGCG
CACGTGGCGG TCTACGACCC GACCAAGGCT TCGGGCAAGG ACCTGTCCAA GAAGTGGCGG
GACGTGTTCT TCGCCACACG CGATGCGTTC AAGAACGAGA TCACCGAGAT TCCGATTGCC
CAGCGCTCAT ACCGGCTGAA GGTGCTGCAG CGCATCGTTT CGAAGGCCGA GTCCATGAAG
AACATGCCGC TGGCTCTGCA GGTACTGGAG CAGGCGGCGA AGGAGTGCGG TGACATGTAC
GTGAACCGCA AGCCTCTGGA TGGTGATGGC AAGGGCGGAG AGGCGCCGCA GCCGGTCAAG
GTCGTCGTGC AGGTGCAGGA CGCAAGCGCC GATGCAGACC GTTAG
 
Protein sequence
MARLDEAVKR FIVQALACYD TPSQVAEAVK EEFGLVLDRA HVAVYDPTKA SGKDLSKKWR 
DVFFATRDAF KNEITEIPIA QRSYRLKVLQ RIVSKAESMK NMPLALQVLE QAAKECGDMY
VNRKPLDGDG KGGEAPQPVK VVVQVQDASA DADR