Gene Daci_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3163 
Symbol 
ID5748747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3480130 
End bp3481134 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID641298266 
Producthypothetical protein 
Protein accessionYP_001564186 
Protein GI160898604 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000218374 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACGCC GCAATTTCAT GATCCGCAGC CTGTCTGCAA CCACGGCGGC CCTGGCCCTG 
GGCGCCCTGG CGCCCGCGCA GTCGGCCCTG GCGGCCGATG CCGGCTGGCC CACGGCCGAG
CCCATCCGCC TGATCGTGCC GTTTCCGCCC GGCGGCACGG CCGATGTGGT GAACCGCCTG
TTCGCGCAGC AGCTGGGCAA GGTGCTGGGC GCCTCGGTGA TCGTGGAGAA CAAGGCCGGT
GCCGGTGGCT CGCTGGGCAC GCGCTTCGTG GCCGATGCCA AGCCGGATGG CTATACGCTG
CTGGGCGCCA CGTCCAGCAC GCACGGCACG AATCCGGCCG TCTACACCAA GCTGCCCTAT
GACGCGGTGA AGGATTTCAC GCCCATCACC CAGGTGATCA CGGTGCCGGG CGTGCTCAGC
GTGCATCCCT CGGTCAAGGC GGCGAATCTG AAGGAGCTGA TCGCGCTGGC CAAGGCGCAG
CCGGGCCATC TGTCGTATGC GTCCTCGGGC GCGGGCGGTC TGGGTCATCT GGCCATGGAG
CTTTTCAAGG CCAAGGCGGG CGTGCAGATC ATGCATGTGC CCTACCGTGG CGCTGGCCCG
GCCTTCACCG ATCTGATCGG CGGCCAGGTG TCCATGCTGT GGGAGCCGCT GCCGGCCTCG
CTGCCGCACA TCAAGTCCGG CAAGATCCGC CCGCTGGCCG TGGCCACGGC CCAGCGCAGC
AGCGAGCTGC CCGACGTGCC GACCTTTGCA GAGTCCGGCG TGCCCGGCTA CGCCGTGCAG
GCCTGGAACG GCCTGCTGGC ACCCAAGGGC CTGCCCAAGG ACATCCGCGA CAAGCTGCAC
AAGGCCAGCG TGCAGGCCCT GGCCGATCCG CAACTGCGCC AGCGCCTGGC AGAGCTGGGC
GGCACGGTGG TGGCCAATAC GCCGGAGCAG TTCGGCGCGG TGATCCTCAA GGATGTGACG
ACCTGGAAGC AGGTGGCCTC TTCGTCGCAG ATCAGCCTGG ATTGA
 
Protein sequence
MQRRNFMIRS LSATTAALAL GALAPAQSAL AADAGWPTAE PIRLIVPFPP GGTADVVNRL 
FAQQLGKVLG ASVIVENKAG AGGSLGTRFV ADAKPDGYTL LGATSSTHGT NPAVYTKLPY
DAVKDFTPIT QVITVPGVLS VHPSVKAANL KELIALAKAQ PGHLSYASSG AGGLGHLAME
LFKAKAGVQI MHVPYRGAGP AFTDLIGGQV SMLWEPLPAS LPHIKSGKIR PLAVATAQRS
SELPDVPTFA ESGVPGYAVQ AWNGLLAPKG LPKDIRDKLH KASVQALADP QLRQRLAELG
GTVVANTPEQ FGAVILKDVT TWKQVASSSQ ISLD