Gene Daci_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3151 
Symbol 
ID5748735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3468289 
End bp3469353 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content73% 
IMG OID641298254 
Producttransport system permease protein 
Protein accessionYP_001564174 
Protein GI160898592 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00069111 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000474317 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGCAC GGCTCCTAGG CGCGGTGGCG CGGCCTGCCC AGCGCTCCTG TTCGCGCTCC 
TCCCTGCACT GCAGGCGTTG GCTGGGCCTT GCAGGCGGGC TGCTGGCGCT GGCCATCATT
GCCGTGCTCG GCATCACCGT CGGCTCGCGC GACATTGCGC TGGCCGACAT CCTCGGCGCG
CTGCGGGCTC CGAACCTGCG TGATGACCAG CACCTGATCG TCAGCCTGCT GCGCATGCCC
CGCACCGTGG TGGCCATCCT GGCCGGCATG GCGCTGGGCG TGGCCGGCGC GCTCATGCAG
GCCGTCACCC GCAATCCCCT GGCGGAGCCG GGCCTGCTGG GCGTCAACGC GGGTGCGGCG
CTGGCCGTGC TCATCGGCAT GACGGCCTTC GGCCTGACGT CCGTGCTCCA GTACGTCTGG
TGCGCCTTTG CCGGCGCGGG GCTGGCGGGC GCCGCCGTCT TCGCGTTCGG CCAGTCCCGG
GGCGCTGGCG CGCACCCGGT GCGCCTGGTC CTGGCCGGGG CCGGCCTGTC GGTCATGCTC
ACCTCCAGCG CCGGCATCAT CCTGCTCAAC GCACCCCCGG AAGTCTTCGA CGGCTTCCGC
CACTGGGCGG CCGGCTCCCT GGAGGGCAGC GGCTATGCCA GCGCCGCCGT GCTGGCGGCT
GCCGTGGCGG CAGGGCTGGC GGCGGCCTGG GCCATCGTCG GCCAGCTCAA CGCCATGGCG
CTGGGGCATG ACGTGGGCCT GGCGCTGGGC GTCAATGTCC GCGCCACCGC GCAACTGGCC
TGCCTTGCGG TCATGCTGCT GGCCGGGGCC GCCACGGCGG CCGTGGGGCC CATCGCCTTC
GTCGGCCTGG TGGCGCCGCA TCTTGCACGC CTCTCGTGCG GGCCGGACTA CCGCTGGATA
CTGCCGCTGT CCGCGCTCTA CGCGGCGGTG CTGCTGCTGG GGGCCGATGT GCTGGGCCGT
GTCGTCGCGG CACCTGCCGA AGTGGCTGCG GGCATCGTCG CCTGCCTGAT CGGCGGGCCG
TTCTTTGTCT GGGTGGCGTG CAGATACCGG TTGAGCAGGC TATGA
 
Protein sequence
MRARLLGAVA RPAQRSCSRS SLHCRRWLGL AGGLLALAII AVLGITVGSR DIALADILGA 
LRAPNLRDDQ HLIVSLLRMP RTVVAILAGM ALGVAGALMQ AVTRNPLAEP GLLGVNAGAA
LAVLIGMTAF GLTSVLQYVW CAFAGAGLAG AAVFAFGQSR GAGAHPVRLV LAGAGLSVML
TSSAGIILLN APPEVFDGFR HWAAGSLEGS GYASAAVLAA AVAAGLAAAW AIVGQLNAMA
LGHDVGLALG VNVRATAQLA CLAVMLLAGA ATAAVGPIAF VGLVAPHLAR LSCGPDYRWI
LPLSALYAAV LLLGADVLGR VVAAPAEVAA GIVACLIGGP FFVWVACRYR LSRL