| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3040 |
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| Symbol | |
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| ID | 5748624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3343288 |
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| End bp | 3344520 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298143 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_001564063 |
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| Protein GI | 160898481 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.298703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.49584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGT CCCGCGCCTA CCTGAGCGAT TCCAGGCCAC GTTTCCGCCC ACCCAGCGCT
GCGGACCTGT GTACCCCCGT TCCCTGCATG ACCGCCGACG AGACCAACGA GAAGGTGCTC
GAGGTCTTCA CGCGCCACCG GGACCTGATC AGCCTGCCCG TGGTGGAGGG CAACCGCCCC
ATCGGCCTGA TCAACCGCAG CATCTTCCTG TCCCAGTTCA GCAAGCCCTT TCGCATGGAG
CTGTACGGCA AGAAGAGCTG CATCGCCTTC ATGGACAAGG AGCCGCTGGT GGTCGATGCC
TCCACCGACA TCGACACCCT GACCGTGAAG ACCGTGGAGT ACGGCGAAAA GGCGCTGACC
GATGGCTTCA TCATCACGCG CGAGGGCCTG TTCGCGGGCG TGGGCAACGG TCTGCAGCTG
ATGCGCGCGG TGGCGGACAT GCAGGTGGCG CGCAACCGCC AGATCATGCA CAGCATCGAA
TACGCCAGCG TGATCCAGCA GTCGCTGCTG CGCAGCTCGC GCGACTCCCT GGCCCGCGCC
TGCCCCGGCG CCGACCTGGT CTGGGAGCCG CGCGATGTGG TCGGCGGCGA CTTCTACCAG
TTCAGCCAGG ACGGCGATGG CTGGTTTGCC ACCGTGGCCG ATTGCACGGG CCACGGCGTG
CCCGGCGCCT TCATGACGCT GATCGCCACC AGCAGCCTGA GCCAGGCCAT CAAGGAGCAC
GGCCCGCGCG ACCCGGCTGC GCTGCTGGGC CATGTGAACC GCAGCGTCAA GCAGATGCTG
GGCCAGCTCG ACGGCAAGGA TGGCACGCCC GGCTCCGACG ACGGGCTGGA CGCGGCCTGC
TTCTGGTTCG AGCCCGCGCA CCGGCGCCTG CGCTTTGCGG GCGCGCGCCT TGCGCTGTTC
GTGCTGCGCC CCGGCGCCGA GGCGGTGGAG GTGCTCGACG GCCAGCGCAA GGGCGTGGGC
TATGTGGACA GCGAGTTCGA CTTCGCCTGG AACAACATCG ACCTGGAGCT GCCCGCCGCC
ACCCTGGTCT TCGTCACCAC CGACGGCCTG ATCGACCAGG TCGGCGGCCC GCGCGGCATC
ACCTTCGGCA AGAAGCGCGT GCGCGAGCTG CTGCTGGAGC AGGCCGGCCG CACGCCCGCC
GAGATCAACC GCGCCCTGCT GGCCGCCCTG CAGGCCTGGC AGGGCGAGCA CCACCGCCGC
GACGACCTGA CCTTTTTCTG CTTCAGAACC TGA
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| Protein sequence | MDESRAYLSD SRPRFRPPSA ADLCTPVPCM TADETNEKVL EVFTRHRDLI SLPVVEGNRP
IGLINRSIFL SQFSKPFRME LYGKKSCIAF MDKEPLVVDA STDIDTLTVK TVEYGEKALT
DGFIITREGL FAGVGNGLQL MRAVADMQVA RNRQIMHSIE YASVIQQSLL RSSRDSLARA
CPGADLVWEP RDVVGGDFYQ FSQDGDGWFA TVADCTGHGV PGAFMTLIAT SSLSQAIKEH
GPRDPAALLG HVNRSVKQML GQLDGKDGTP GSDDGLDAAC FWFEPAHRRL RFAGARLALF
VLRPGAEAVE VLDGQRKGVG YVDSEFDFAW NNIDLELPAA TLVFVTTDGL IDQVGGPRGI
TFGKKRVREL LLEQAGRTPA EINRALLAAL QAWQGEHHRR DDLTFFCFRT
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