Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3031 |
Symbol | |
ID | 5748615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3334541 |
End bp | 3334975 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641298134 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001564054 |
Protein GI | 160898472 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00544929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.808496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACCC ATACCCGCAT CCGCATGTTC AACACCAAGG ACACCTATCC CAACCAGTCG CTGGACAACG ACCTGTGCCA GGCCGTGCGC GCCGGCAACA CCGTCTATGT GCGCGGCCAG ATCGGCACCG ATTTCGAGGG CAACCTGGTC GGCCTGGGCG ATCCGCAAAA GCAGGCCGAG CAGGCGATGA AGAACGTCAA GCAGCTGCTG GAGGAAGCGG GCAGCGACCT GTCGCACATC GTCAAGACCA CCACCTACAT CATCGACCCG CGCTACCGCG AGCCCGTCTA CCGTGAAGTG GGCAAGTGGC TCAAGGGCGT GTTTCCCATC TCCACGGGGC TGTGCATCTC GGCCCTGGGG CAGCCGCAGT GGCTGATGGA GATCGACGTG ATCGCGGTCA TCCCCGATGA CTGGCAGCCG CCGGCCAGCG CCTGA
|
Protein sequence | MPTHTRIRMF NTKDTYPNQS LDNDLCQAVR AGNTVYVRGQ IGTDFEGNLV GLGDPQKQAE QAMKNVKQLL EEAGSDLSHI VKTTTYIIDP RYREPVYREV GKWLKGVFPI STGLCISALG QPQWLMEIDV IAVIPDDWQP PASA
|
| |