| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3001 |
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| Symbol | |
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| ID | 5748585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3306505 |
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| End bp | 3307344 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298104 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001564024 |
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| Protein GI | 160898442 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.166986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT CCGCCCCCAC CCCTCTTTCA TCTTCCTCGC CCTTGCCCCC GCCCATTTCC
GACGAGCAGC TGCACGCCCT GGTCGATGGC CGCCTGCCCG CGCAGCAGGC GCAGGCGCTG
CGCGACCAGC TGGACGAAGA CAGCGCCGCG CGCGTGGAGC AATGGCAACG CCAGCGCCAG
TTGCTGCGCG CCCTGCCTGC TGCCCGGGAC GAACCCGGCA TGCCCGACGA AATGCGCGCC
GCCGCCGAAC AGTTGCAGGG CCTGCACCAG CGCCAGCAGC AGTGGTGGCG CTGGGGTGGC
ATGGCCGCGG GCTGGATGCT GGCCTTCGGC CTGGGCTGGC TGGTGCATGG GCAGCAGGCG
GTGCCCGCCG CCGCGCCATC AACGGCGGCC ACGCTGGCTG CTGCCTCCCC GGCCCGCTTC
GCCCACCAGG CGGCCGTCGC CCACGCGGTC TACCAGCCCG AGCAACGCCA CCCGGTCGAG
GTGGAGGCCG CGCAGCAGGC CCATCTGCTG CAGTGGCTGT CCAAGCGCCT GGGCCGGCCG
CTGAAGCTGC CGGCACTCAC GGACCTGGGC TATGAGCTGG TGGGCGGCCG ATTGCTGCCC
GGCGACAGCG GCGCACGCGC CCAGTTCATG TACCAGGACG CGGCGGGCGA GCGCATCACC
CTGTACCTGG GTGCGCTGGA GGACCCGGCC ACGCGCGGCG AGACCGCCTT TCACTTCAGC
AGCGACGGCC CCGTGCCCAG CTTCTACTGG GTGGACCAGG GCTTTGGCTA TGCGCTCAGC
GGCGCCCTGC CGCGCAACCA GCTGCTGCAG CTGGCCACGG CCGTGCACCA GCAGCTTTGA
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| Protein sequence | MTASAPTPLS SSSPLPPPIS DEQLHALVDG RLPAQQAQAL RDQLDEDSAA RVEQWQRQRQ
LLRALPAARD EPGMPDEMRA AAEQLQGLHQ RQQQWWRWGG MAAGWMLAFG LGWLVHGQQA
VPAAAPSTAA TLAAASPARF AHQAAVAHAV YQPEQRHPVE VEAAQQAHLL QWLSKRLGRP
LKLPALTDLG YELVGGRLLP GDSGARAQFM YQDAAGERIT LYLGALEDPA TRGETAFHFS
SDGPVPSFYW VDQGFGYALS GALPRNQLLQ LATAVHQQL
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