| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2993 |
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| Symbol | |
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| ID | 5748577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3297950 |
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| End bp | 3299776 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641298096 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001564016 |
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| Protein GI | 160898434 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0818072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC AAATCCGCAA TATCGCGATC ATCGCCCACG TGGACCACGG CAAAACCACC
ATGGTGGACC AGCTGCTGCG CCAATCCGGA ACCTTCGCCG AACACGAGAA AGTCGTGGAC
ACGGTGATGG ACAACAACGC CATCGAACGC GAGCGTGGCA TCACCATCCT GGCCAAGAAC
TGCGCCGTGA GCTGGAACGA GACGCACATC AACATCCTCG ACACACCCGG CCACGCGGAC
TTCGGTGGTG AAGTGGAGCG TGCCCTGTCC ATGGTGGACG GCGTGGTGCT GCTGATCGAC
GCGCAGGAAG GCCCCATGCC CCAGACGCGC TTCGTGACCA AGAAGGCACT GGCCCTGGGC
CTGAAGCCCA TCCTCGTGGT CAACAAGGTG GACAAGCCCG GTGCGCGTCC CGACTACGTG
GTCAACGCCG CATTCGACCT GTTCGACAAG CTGGGTGCCA CCGACGAGCA GCTGGACTTC
CCCGTGGTGT ACGCCTCGGG CATCAACGGC TGGACCTCGC TGGAAGAAGG CGCTCCCGGC
GAGCAGTGGG GCCCCGACAT GTCGGCCCTG TTCGACACCA TCCTGAAGCA CGTTCCCGCC
GTCAAGGGCG ATCCTGCCGC TCCGCTGCAG ATGCAGATCT CGGCGCTGGA CTACTCCACC
TTCGTGGGCC GTATCGGCGT GGGCCGCATC ACCTCCGGCA CGCTCAAGCC TTCGACCGAC
GTGCTGGTCA TGGAAGGTCC TGACGGCAAG AGCTACAAGG GCCGCATCAA CCAGGTTCTG
AAGTTCCAGG GCATTGACCG CGTGCAGGTG ACCGAAGCCG GTCCCAGCGA CATCGTGCTG
GTCAACGGCA TCGCCGACCT GGGCATGGGC GTCACGCTGA CCGACCCGCT GAACCCCCGG
CCGCTGCCGA TGCTCAAGAT CGACGAGCCC ACGCTGACCA TGAACTTCTG CGTCAACACC
TCGCCCCTGG CAGGTCGTGA AGGCAAGTTC GTGACCAGCC GCCAGATCTG GGACCGCCTG
CAAAAGGAAC TGCGTTCCAA CGTGGCCCTG CGCGTCAAGG AAACCGACGA AGACGGCATC
TTCGAAGTGT CGGGCCGCGG CGAACTGCAC CTGACCATCC TGCTGGAAGA AATGCGCCGT
GAAGGCTACG AGCTGGCCGT GTCCAAGCCC CGCGTGGTCT ACCGCGACGT GGACGGCGTG
CGCCACGAGC CTATCGAGCT GGTGACGGCC GACATCGAAG AAGGCCACCA AGGTGGCGTG
ATGCAGGCCC TGGGCGAGCG CAAGGGCGAG CTGGTCAACA TGGAACCCGA TGGCCGCGGC
CGCGTGCGCC TGGAGTACCG CATTCCTGCG CGTGGCCTGA TCGGCTTCAC CAACGAATTC
CTGAACCTGA CCCGTGGTTC CGGCCTGATC TCCAACATCT TCGACAGCTA CGAGCCGCAC
AAGGGCGAAA TCGGCGGCCG CAAGAACGGT GTGCTGATCT CCATGGACGA AGGCGAAATC
TTCACCTACG CCCTGGGCAA GCTGGACGAC CGTGGCCGCA TGTTCGTCAA GGCCAACGAT
CCCGTGTACG AAGGCATGAT CATCGGCATC CACAGCCGCG ACAACGACCT GGTGGTCAAC
GCCACGCGTA CCAAGCAGCT GACCAACTTC CGCGTGTCCG GCAAGGAAGA TGCCATCAAG
ATCACGCCCC CGATCGACCT GTCGCTGGAA TACGCGGTGG AATTCATCGA GGACGACGAG
CTGGTGGAAA TCACCCCCAA GAGCATCCGC GTTCGCAAGC GCCACCTGTC CGAGAACGAG
CGCAAGCGCG CTTCGCGCGG CGCATAA
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| Protein sequence | MSKQIRNIAI IAHVDHGKTT MVDQLLRQSG TFAEHEKVVD TVMDNNAIER ERGITILAKN
CAVSWNETHI NILDTPGHAD FGGEVERALS MVDGVVLLID AQEGPMPQTR FVTKKALALG
LKPILVVNKV DKPGARPDYV VNAAFDLFDK LGATDEQLDF PVVYASGING WTSLEEGAPG
EQWGPDMSAL FDTILKHVPA VKGDPAAPLQ MQISALDYST FVGRIGVGRI TSGTLKPSTD
VLVMEGPDGK SYKGRINQVL KFQGIDRVQV TEAGPSDIVL VNGIADLGMG VTLTDPLNPR
PLPMLKIDEP TLTMNFCVNT SPLAGREGKF VTSRQIWDRL QKELRSNVAL RVKETDEDGI
FEVSGRGELH LTILLEEMRR EGYELAVSKP RVVYRDVDGV RHEPIELVTA DIEEGHQGGV
MQALGERKGE LVNMEPDGRG RVRLEYRIPA RGLIGFTNEF LNLTRGSGLI SNIFDSYEPH
KGEIGGRKNG VLISMDEGEI FTYALGKLDD RGRMFVKAND PVYEGMIIGI HSRDNDLVVN
ATRTKQLTNF RVSGKEDAIK ITPPIDLSLE YAVEFIEDDE LVEITPKSIR VRKRHLSENE
RKRASRGA
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