| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2988 |
|---|
| Symbol | |
|---|
| ID | 5748572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3291540 |
|---|
| End bp | 3292118 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641298091 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564011 |
|---|
| Protein GI | 160898429 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.390443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACTAC AGCAAATCGT TGAACAAACC GTGACAGGTC TGGGCTATGA CCTGGTGGAA
ATAGAACGCT CCGCGGGCGG GCTGTTGCGC GTCACAATTG ATTTGCCTTG GCAGCCCCCG
GTGGAGGGCG GGCCGGTGGT GCCGGAGCAG TTCGTGACAG TCGAGGACTG CGAGAAGATC
ACGCGCCAGC TGCAGTTCGC GCTTGAGGTT GATGGCGCAG ATTACACGCG CCTTGAGGTC
TCCTCCCCTG GTATCGATCG CCCCCTGCGG CACGAGCAGG ACTTCACCCG CTTTGTCGGT
GAAGTCATCG ACCTGACCCT CAAGGAGCCC ATCGGCGCCG CCGCTGAAGG GCAGGTCAGC
GCCAATCGCA AGAAATTCCG CGGCACGCTG GAGCGTGCCG AAGATGGTGG CTGGCAGATC
GTCTGGAGCG ACGAGCCACC CGTCAAGCCT GGCCAGAAGG TCAGCAAAAA GCGTGTTCCC
GCGCCCCTGC AGGCGCTGGG CTTCACTCTG GAGGAGCTGC GCGAGGCGCG TCTGGCTCCC
ATCGTGGATT TCAAGGGGCG TTCTGCCAAG CCGGTCTGA
|
|---|
| Protein sequence | MALQQIVEQT VTGLGYDLVE IERSAGGLLR VTIDLPWQPP VEGGPVVPEQ FVTVEDCEKI
TRQLQFALEV DGADYTRLEV SSPGIDRPLR HEQDFTRFVG EVIDLTLKEP IGAAAEGQVS
ANRKKFRGTL ERAEDGGWQI VWSDEPPVKP GQKVSKKRVP APLQALGFTL EELREARLAP
IVDFKGRSAK PV
|
|---|
| |