Gene Daci_2986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2986 
Symbol 
ID5748570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3289520 
End bp3290863 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID641298089 
Productgluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001564009 
Protein GI160898427 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.47949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC TGGCAGAAAA CGCGGCAAGC GGGAACACAC GCGGGCGACG GCGGCTGGCC 
AGGGTGGCAG GGCTGGCGTT GCTGATCATC GCCCTGCTGG GCGCGCTCCT GGCCTGGTTC
AACCTGCGCG GTGAGCAGGG CGTGCACGCC TACGGTCATG GCGGCTGGTC AGGCGCGCGC
GAAACGCCAG CCGCCTTGAT AGAGCGCGGT GCCTACCTGG CCCGCGTGGG CAACTGCGCA
GGCTGCCATA CGGCGGCTGG AGGCGCCGAG TATGCGGGCG GGCGGGGTCT GCCCACCTCG
TTCGGCACGC TGTACACCAG CAATCTCACG CCTGACAAGG AAAGTGGCCT GGGGCTGTGG
ACGGCCCAGG ACTTCTGGCG TGCAATGCAT AACGGGCGGT CACGGGAAGG GCGCCTGCTG
TATCCGGCCT TTCCATATGA CAGCTACACC CATGTGACGC GCGCCGACTC GGACGCATTG
TTTGCCTATC TGCAAAGCCT GCCCGCCGTG CGCGCGCAGG TGCCCCGGCA TGCGCTGGAC
TTTCCCTATG GCTGGCAGGG CTCGCTGGCT GTCTGGCGCG CGCTGTTCTT CACCCCGCAG
GATTGGCAGG ACCGGCCGCA GAAGGCGGCT GCCTGGAATC GCGGTGCCTA TCTTGCCCAG
GGCCTGGGGC ACTGCGCGGC GTGCCACGCG CCGCGCAACG GCATGGGTGC CTCGTCTCAG
GCCATGTCCG GTGGCTTTGT GGCAGGGCAG GCCTGGTATG CGCCGTCGCT GCTTGATCCG
GGCGAAGCCG GCGTGCGCGA GGGCCAGGAG TCCGCCTGGG TGCAGTTGCT GCAGACGGGT
TCGGGTCCTT CGGGATCGGC GCTGGGCCCC ATGGCCGAAG TCGTGGCGCG CAGCACCCAG
CACTGGCAGC CGCAGGATCT GCAGGCACTT GCTTCCTACC TGCAGGAGCA GGGCGCGACA
GCAGGCCCGC CCAGGAGCAG GCCTGCTGCC GCGCCCGTGC CATCCGGGCA AATGGCCTTG
GGGCGGGCCA TCTACGAGCG GCAATGCGCG GTATGCCACG GTGCAGAGGG CCAGGGGACG
CCGGGCGCGT TTCCCGCGCT TGCGGGCAAT GCCTCCGTGA CCCTGGCCGA GCCGCGCAAC
CTGTTGCTGG TGTTGCTGGA GGGGGGCTAC CCACCCTCCA CCCGGCAGCA GCCGCAGCCG
CACGGCATGC CGCCTTTCGG TCATGTGCTG TCCGACGCAC AGGTGGCCGC CGTGGCCAGC
TATGTGCGCA ACGCCTGGGG CAACAAGGCA GCGGAAATCG GTAACATGGA GGTTTATCGC
GCCCGGGAAG GGCGTGGTTT CTGA
 
Protein sequence
MNTLAENAAS GNTRGRRRLA RVAGLALLII ALLGALLAWF NLRGEQGVHA YGHGGWSGAR 
ETPAALIERG AYLARVGNCA GCHTAAGGAE YAGGRGLPTS FGTLYTSNLT PDKESGLGLW
TAQDFWRAMH NGRSREGRLL YPAFPYDSYT HVTRADSDAL FAYLQSLPAV RAQVPRHALD
FPYGWQGSLA VWRALFFTPQ DWQDRPQKAA AWNRGAYLAQ GLGHCAACHA PRNGMGASSQ
AMSGGFVAGQ AWYAPSLLDP GEAGVREGQE SAWVQLLQTG SGPSGSALGP MAEVVARSTQ
HWQPQDLQAL ASYLQEQGAT AGPPRSRPAA APVPSGQMAL GRAIYERQCA VCHGAEGQGT
PGAFPALAGN ASVTLAEPRN LLLVLLEGGY PPSTRQQPQP HGMPPFGHVL SDAQVAAVAS
YVRNAWGNKA AEIGNMEVYR AREGRGF