Gene Daci_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2963 
Symbol 
ID5748547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3263806 
End bp3264231 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID641298066 
Producthypothetical protein 
Protein accessionYP_001563986 
Protein GI160898404 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.154131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATT CCACCATCTG GTGGCTAGTC GCCGGCGCCT TGGTCATCGC CGAGCTGCTG 
ACCGGCAGCT TCTATCTGCT GATGCTGGCG CTGGGCGCCA TCGTCGGCGC GCTGTGCGCG
CATGCGGGCC TGGCGCCCAT TGCACAGATC ATCATCGCCG CCGCGCTGGG CAGCGCCTTC
GTGCTGGCCT GCTATCTGGT GCGCCGCCGC CAGCCCAGCC GCCAGCCGGC ATCGAGCAAC
CGCGATGTCA ATCTCGACAT AGGCGAGTCC GTCATGGTCG AGCAATGGAA TTCCGACGGC
ACGGCCCAGG TCCGCTACCG TGGCGCCCAA TGGACCGTGA TCGGCCGCCC GGGCAACCTG
CCCTCGGCCG GAATGCACCG CGTGGCCGAG GTCGTCGGCA ACCGGCTGCT CGTGGACAAG
CTCTGA
 
Protein sequence
MEYSTIWWLV AGALVIAELL TGSFYLLMLA LGAIVGALCA HAGLAPIAQI IIAAALGSAF 
VLACYLVRRR QPSRQPASSN RDVNLDIGES VMVEQWNSDG TAQVRYRGAQ WTVIGRPGNL
PSAGMHRVAE VVGNRLLVDK L