Gene Daci_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2939 
Symbol 
ID5748521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3228279 
End bp3229859 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content66% 
IMG OID641298040 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_001563962 
Protein GI160898380 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.885182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.376715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTCA ATTCCTATCT TTTCCTGCTG CTGTTCCTGC CCATCGCGCT GGCGGGCCAC 
TACCTGGCCG GGGCCATCAG CCTGCGGCTG GCCGCGTTCT GGCTGTGCCT GACGTCCTTT
GTCTTCTACG GCTGGTGGAA CCCGCAGTTC GTCGCCCTGC TGGCGCTGTC CATCGCCTTC
AACTACGTGG TGAGCCTGCT GATCCTGCGC TTTGCGGGCC GTGCGCGGCT GCAGGGGCTG
GTCACCGCCC TGGGCGTGGG CGCCGACCTG GCGGCACTGT TCCACTACAA GTACTTCGCC
ACGCTGTTCA ACTTCCTGGG CGAATGGGGG CTGACGCAGG GCGGGATGCA CGAGCTGATC
CTGCCGCTGG GCATCTCGTT CTTCACCTTC ACCCAGATCG GCTACCTGCT GGACTGCCGC
TCGGGCATCG TCAAGGAACG CAGCCTGCTC AGCTACGTGC TGTTCGTGAC CTTCTTCCCG
CACCTGATCG CGGGGCCCAT CCTGCACCAC AAGGAAATGA TGCCGCAGTT CGCGCAGCCG
GATAACTACC GGTTCCGCGC GGACAACCTG TCCATCGGCG GCACGCTGTT CGTGATCGGC
CTGGCCAAGA AGGTGCTGCT GGCCGACGAG ATCGCGCCCT ATGCGGACGC GGGATTCGCC
GCGCCCGGCG AGCTGCAGTT CTGGGCCGCC TGGGGCGCCA GCCTCAGCTA CGCGCTGCAG
CTGTACTTCG ACTTCTCGGG CTATTCGGAC ATGGCGCTGG GCCTGGCGCG CATGTTCGGC
ATCCGTTTCC CGCTGAACTT CAACTCGCCC TACAAGGCCG GCAGCATCAT CGACTTCTGG
GCACGCTGGC ACATGACGCT GACGCGCTAC CTCACGGCCT ACCTGTACTA CCCCGTGGCC
ATGGCCATCT CGCGCGCACG CGAAAAGCGC GGCCTGTCCG TGGGCTCCAG CGCCGCGCGC
ACGCCCGGCG GCTTTGCGGC CACCATCGTC GTGCCCACGC TGTTCACCAT GGGGCTGGCG
GGCATCTGGC ACGGCGCAGG CCTGCAGTAC GTGATCTTCG GCCTGCTGCA TGCCTTCTAC
CTGTCGGTCA ACCACGCCTG GCGCATCTTC GTGGTCAGCC GCAAGCCGGC CGCCGCACGC
AAGTCGGGCC GGGGCGTGCA GGCGCTGTGC GTTGTCATCA CCTTCATTGC CGTGCTCATC
GCCCAGACCT TCTTCCGCGC CCACGGCGTG GGCGACGCCA TGCTGCTGCT CAAGGGCATG
GCCGGCCTGC GCGGCGTGGA GGCGCTGGAA TCGCTGTCGC ACCTGCAGGG CCTGGCCGTG
GGCGACGCGC TGCGGCTGGC CATAGGCCAC CACATGCAGC TGGCCCTGGT CCTGCTGCTG
CTGGCCATTG CCTGGTTCAC GCCCAATGCC CACCAGATCC TGGGCCGCTT CTCGCCCGCC
ATGTTCAAGG TGCAGGAAGC GCCCCGCGCC TGGATGCGCT GGCGCCCCAG CGCAGGCTGG
ACGGCCGTGA CCCTGTTCCT GCTGTTCCTG TGCCTGGTCA ACCTGCACAA GGAAACCCGC
TTCCTGTATT TCCAGTTCTG A
 
Protein sequence
MLFNSYLFLL LFLPIALAGH YLAGAISLRL AAFWLCLTSF VFYGWWNPQF VALLALSIAF 
NYVVSLLILR FAGRARLQGL VTALGVGADL AALFHYKYFA TLFNFLGEWG LTQGGMHELI
LPLGISFFTF TQIGYLLDCR SGIVKERSLL SYVLFVTFFP HLIAGPILHH KEMMPQFAQP
DNYRFRADNL SIGGTLFVIG LAKKVLLADE IAPYADAGFA APGELQFWAA WGASLSYALQ
LYFDFSGYSD MALGLARMFG IRFPLNFNSP YKAGSIIDFW ARWHMTLTRY LTAYLYYPVA
MAISRAREKR GLSVGSSAAR TPGGFAATIV VPTLFTMGLA GIWHGAGLQY VIFGLLHAFY
LSVNHAWRIF VVSRKPAAAR KSGRGVQALC VVITFIAVLI AQTFFRAHGV GDAMLLLKGM
AGLRGVEALE SLSHLQGLAV GDALRLAIGH HMQLALVLLL LAIAWFTPNA HQILGRFSPA
MFKVQEAPRA WMRWRPSAGW TAVTLFLLFL CLVNLHKETR FLYFQF