| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2889 |
|---|
| Symbol | |
|---|
| ID | 5748470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3170564 |
|---|
| End bp | 3171466 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641297989 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001563912 |
|---|
| Protein GI | 160898330 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.766287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC TGAACGACCT CTACTACTAC GTGCAGGTGG TGGACCACGG CGGCTTTGCG
CCCGCGGGCC GCGCGCTGGG GATGCCCAAA TCCAAGCTGA GCCGGCGCAT CGCGCAGCTT
GAGGAGCGTC TCGGCACGCG CCTGATCCAG CGCTCCACGC GGCGATTTGC CGTCACCGAG
ACCGGCCAGA CCTACTACGG CCACTGCAAG GCGATGCTGG TGGAGGCCGA CGCCGCCGAC
GAGGCCATCG CGCTGACCCA CGCCGAGCCG CGCGGCATCG TGCGCATGAC CTGCCCGGTG
GCGCTGCTCG ATGCGCGCAT CGCCGACATG CTGGCGGCCT TCATGGCCGC GTATCCGCGC
GTGGAGATCC ACCTCGAGGA AACCAACCGC CGCGTGGACG TGGTGGGCGA AGGAATCGAC
GTTGCCATCC GCGTGCGCCC GCCGCCGCTG GAAGACAGCG ACCTGGTGAT GCGCATGCTC
GCCGAGCGCG GGCAATGCCT GGTGGCCTGC CCGCGGCTGT TGACAGGCGG CATCCCCCAG
GTGCCCGCCG ACCTGGCAGG CCTGCCGAGC ATGGACCTGG GCCTGCCGCA GCACGAGCAT
GTGTGGCACC TGATCGGCCC GGACGGCACG CAGGCGGCCA TCCGCCACCG GCCGCGCCTG
GTCACGCGCG GCATGCTGGC GCTGCGCGCG GCGGCCTTGG CGGGGGTGGG CGTGGTGCAA
CTGCCCTCGA TGATGGTGCG CGAGCAGATC GCGCGCGGTG AACTGGTCCA CGTCATCCCG
GGCTGGGCGC CACGGCGCGA GATCATCCAT GCGGTGTTCG CCTCACGGCG CGGGCTGCTG
CCGGCCGTGC GGGCGCTGCT GGATTTCCTG GCAGAGCGGT TTGAGGCGCT GGACGAAGAC
TGA
|
|---|
| Protein sequence | MKDLNDLYYY VQVVDHGGFA PAGRALGMPK SKLSRRIAQL EERLGTRLIQ RSTRRFAVTE
TGQTYYGHCK AMLVEADAAD EAIALTHAEP RGIVRMTCPV ALLDARIADM LAAFMAAYPR
VEIHLEETNR RVDVVGEGID VAIRVRPPPL EDSDLVMRML AERGQCLVAC PRLLTGGIPQ
VPADLAGLPS MDLGLPQHEH VWHLIGPDGT QAAIRHRPRL VTRGMLALRA AALAGVGVVQ
LPSMMVREQI ARGELVHVIP GWAPRREIIH AVFASRRGLL PAVRALLDFL AERFEALDED
|
|---|
| |