Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2877 |
Symbol | uvrC |
ID | 5748455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3155216 |
End bp | 3157168 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641297974 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001563900 |
Protein GI | 160898318 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.776439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CCCATTCCGA TGAACTGCTG GCCCAGGTGG CAGCGCTGCC GGGCCTGCCC GGCGTCTACC GCTATTTCGA CGCGGCAGGC ACGCTGCTGT ACGTGGGCAA GGCCATCAAC CTCAAGCGCC GCGTCTCCAG CTACTTCACC AAGAACCATG GCGGCACGCG CATAGGCCAC ATGGTGGGCA AGATCGCCCG CATGGAGACC ACGGTGGTGC GCTCCGAGGC CGAGGCCCTG CTGCTCGAAA ACAACCTCAT CAAGACGCAG CACCCCAAGT ACAACATCCT GTTTAGGGAC GACAAGAGCT ATCCCTACCT GAAGATCACC GGCGTGGCCG CGCGCGACGG CCAGGCTGGC GAGCCTGCCC ACCAGCGCTT CGCGCGCATG GCCTACTACC GTGGTGCCGT GGACAAGCGC CACCGCTACT TCGGTCCCTA TCCGAACGCC TGGGCCGTCA AGGAAAGCAT CCAGCTGCTG CAAAAGGTCT TCCGGCTGCG CACCTGCGAG GACACGGTCT TTGCCAACCG CTCGCGCCCC TGCCTGCTCT ACCAGATCAA GCGCTGCAGC GGCCCTTGCG TGGATCTGAT CTCGCCCGAA GCCTATGCGC TGGATGTGCG CAATGCCGAG GCCATGCTGC GCGGCGAAAC CCAGGAACTG CTGCGCCAGC TCGAGGCCCG CATGATGGAG CACGCCGGGC GCATGGAATA CGAGCAGGCC GCCGAGGTAC GCAACCAGAT GACGGCGCTG TCGCGCGTGC TGCACCAGCA GGTCATAGAA ACCGCCGACG ACCGCGACGT GGACATCCTC GCCGTGAAGG TGCAGGGCGG CCGCGCCTGC GTGAACCTGG CCATGGTGCG CGGCGGCCGC CACCTGGGCG ACCGGCCGTA CTTTCCCGCC AATCTGGGCG ATGCCGCCTC GGTCTACGCC GGCGAGGAAG AGGCCAATCT TGCCGAATCC GCGCGCCCGG TCGAGGACAT CGTGCTGGAG GCCTTCATCG CCCAGCACTA CACCGGCGTG GCCGTGCCGC CCGTGCTCAT CGTCAGCCAT CCGGTGGACA AGAAGCTGCT GGCCCTGCTG AGCGAGCAAG GCGGCGTGCG CATCACCGCC GTGCAGCAGC CGCGCGAGCA GCGGCGCATC TGGCTGGAGA TGGCGCAAAA GAACGCCGAC ATCCAGATGG CCCGCCTGCT GGCCGAAGAA GGCTCGCAGC AGGCGCGCAC GCGCGCGCTG GTCGAGGCGC TGGACCTGGC CTGCGAGAAC CTGGACGAGC TCACCATCGA ATGCTTCGAC ATCTCGCACA CGGCGGGCGA GGCCACGCAG GCCTCCTGCG TGGTCTTCCA TCACCACAAG ATGCAAAGCA GCGAATACCG GCGCTTCAAC ATCGAAGGCA TCACGGGCGG CGACGACTAT GCCGCCATGC GCCAGGTGCT GACGCGCCGC TACAGCCGCG TGGCCGAGGC GCAAAGAGAG GCGGGCGGTG CCGAGCTCAC CGGCAAGCAG CCGCAACTGC CGGACCTGGT GCTGGTCGAC GGTGGCAAGG GCCAAGTCAG CATGGCGCGC GAAGTCTTCG AGCAGCTGGG CCTCGATGTC TCGCGCATCG TGGGCGTGGA AAAGGGCGAG GGGCGCAAGG TCGGCCTGGA AGAGCTGGTC TTTGCCGACG GGCGCGAGAA GATCTACCTG GGCTACGACT CGGCCGCGCT GATGCTGGTG GCCCAGATCC GCGACGAGGC CCACCGCTTC GCCATCACCG GCATGCGCGC GGCGCGTGCC AAGGTGCGCG TGGGCGGCGG CAAGCTCGAG GAGATTCCGG GCGTCGGCCC CAAGAAGCGA GCGCGCCTGC TGCAGCGCTT TGGCGGCGTG CGCGGCGTGT CCGAAGCCAC CGTCGAGGAC CTGTGCAGCG TGGACGGCAT CTCGGCCGCG CTGGCTGAAG ATATCTACCG TGCATTGCAT TGA
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Protein sequence | MSESHSDELL AQVAALPGLP GVYRYFDAAG TLLYVGKAIN LKRRVSSYFT KNHGGTRIGH MVGKIARMET TVVRSEAEAL LLENNLIKTQ HPKYNILFRD DKSYPYLKIT GVAARDGQAG EPAHQRFARM AYYRGAVDKR HRYFGPYPNA WAVKESIQLL QKVFRLRTCE DTVFANRSRP CLLYQIKRCS GPCVDLISPE AYALDVRNAE AMLRGETQEL LRQLEARMME HAGRMEYEQA AEVRNQMTAL SRVLHQQVIE TADDRDVDIL AVKVQGGRAC VNLAMVRGGR HLGDRPYFPA NLGDAASVYA GEEEANLAES ARPVEDIVLE AFIAQHYTGV AVPPVLIVSH PVDKKLLALL SEQGGVRITA VQQPREQRRI WLEMAQKNAD IQMARLLAEE GSQQARTRAL VEALDLACEN LDELTIECFD ISHTAGEATQ ASCVVFHHHK MQSSEYRRFN IEGITGGDDY AAMRQVLTRR YSRVAEAQRE AGGAELTGKQ PQLPDLVLVD GGKGQVSMAR EVFEQLGLDV SRIVGVEKGE GRKVGLEELV FADGREKIYL GYDSAALMLV AQIRDEAHRF AITGMRAARA KVRVGGGKLE EIPGVGPKKR ARLLQRFGGV RGVSEATVED LCSVDGISAA LAEDIYRALH
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