Gene Daci_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2876 
Symbol 
ID5748454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3154171 
End bp3155157 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID641297973 
Producthypothetical protein 
Protein accessionYP_001563899 
Protein GI160898317 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.364701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TTCAACGCAG ACAGATCGCA GCCGTGGCCA TGGCCATCGC AGGGCTGGGC 
CTGGGCGGCA CAGCCGCGCT GGCCCAGGGC GGCTACCCCG CCAAGACCAT CACCATGATC
GTGCCGGCCG CAGCCGGCGG CACTACCGAC CTGGCGGCGC GCATGGCGGC CCAGGCGCTG
GCGCCGGTGA TCGGCCAGTC GGTGGTGGTG GACAACAAGG GCGGCGGCAA CGGCTCCATC
GCAGCCAGCC TGGTCAAGCG TGCCGAGGCC GATGGCTACA CCCTGCTCAT GCAGTACTCG
GGCTACCACG TCATCTCGCC CCACCTGACC AAGGCCCGCA ATTGGGAGCA GGGCGACTTC
CAGCCCGTGG CCAATGTGCT GTCGGCGCCG CAGATCATCG TGGTGCGGTC CGAGCTGCCC
GTGAAGACGC TGGCCGAACT CGTGGCCTAT GCCAAGGCCA ACCCCGGCAA GCTGAACTAC
GCCTCGTCGG GCAATGGCTC GCTGCAGCAC GTGACGGGCG CCATGCTGGA GCAGCAGGCC
GGCATCAAGA TGGTCCACGT CCCCTACAAG GGCACCGGCC CCGCGCTGCA GGACCTGCTG
GGCGGCCAGG TGGACCTGAC CTTCGGCACG GCGCCGCCCT TCATGCCCCA CGTGCAAAGC
GGCAAGCTGC GCGTGCTGGC CGTCACCGGC ACGCAGCGCC TGCCCAGCCT GCCTGATGCG
CCCACCACGG CCGAGGCCGG CTATGCGGGC GTCAACGCCA CCTCCTGGTT TGCCGTGTTT
GCGCCCGCCG CCACGCCCAA GCCCGTGATC GACAAGCTCA CGGCCGACCT CAAGAAGGTG
GTGGAGAACC CGGCCTTCAA GCAAAAGGCG CAGGAGCAGG GCGCCACGGC GGACTACATG
AACCCGCAGC AGCTGGGCGC CATGGTCAAG ACCGAGTGGT CCAACTGGGC CCAGGTGGTC
AAGTCCTCGA AGATCGAGGC CGAGTAA
 
Protein sequence
MKKIQRRQIA AVAMAIAGLG LGGTAALAQG GYPAKTITMI VPAAAGGTTD LAARMAAQAL 
APVIGQSVVV DNKGGGNGSI AASLVKRAEA DGYTLLMQYS GYHVISPHLT KARNWEQGDF
QPVANVLSAP QIIVVRSELP VKTLAELVAY AKANPGKLNY ASSGNGSLQH VTGAMLEQQA
GIKMVHVPYK GTGPALQDLL GGQVDLTFGT APPFMPHVQS GKLRVLAVTG TQRLPSLPDA
PTTAEAGYAG VNATSWFAVF APAATPKPVI DKLTADLKKV VENPAFKQKA QEQGATADYM
NPQQLGAMVK TEWSNWAQVV KSSKIEAE