| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2840 |
|---|
| Symbol | |
|---|
| ID | 5748416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3114421 |
|---|
| End bp | 3115323 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641297935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001563863 |
|---|
| Protein GI | 160898281 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.316251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.316711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA ACACCACATG GAACCGCGCC TGGCCCCTGC TGGCCGTGCT GGGCTCGGTC
ACGGCACTGG GCGTGGGCAC TTCTCTGGCC AAGCAGCTTT TTCCGGTGCT GGGCGCCCAG
GGCACTTCGG CATTGCGCGT GGGCTTTGCC GCGCTGATCC TGGTGGCCAT CTGGCGGCCC
TGGCGCTGGA CGCTGGCCCG CCCCCAGGCG TGGGCGCTGC TGCGTTTCGG CGTGGCGCTG
GGCGCCATGA ACCTGCTGTT CTACATGGCG CTGCGCACCA TTCCCTTTGG ACTGGCCGTG
GCCATCGAAT TCTCCGGCCC GCTGGCCGTG GCCATCTACC ACTCGCGCCG GCCGGTGGAC
TTTGTCTGGC TGGCGCTGGC CGTGGCGGGG CTGGCCCTGA TTTTGCCGAT AGGGGGCGTC
GGCGCGGGCG GATTGGTGCT GGAGCCCGTG GGCATTGCCT GCGCCGTGGG CGCTGCCATC
TGCTGGGCGC TGTACATCCT GCTGGGGCAG CGCCTGGGCA GCATTCCCGG CGGCCAGGCC
GTGTCGCTGG GCCTGGTGTT CGCCGCCATG GTGGTGGTGC CCTTCGGCGT GGCCGAGGCG
GGGGCCAAGC TGCTGCAGCC GTCCATCCTG GCCTTCGGCC TGGTGGTGGC GGCCATCTCC
AGCGCCTTGC CCTATACGCT GGAGATGATG GCCCTGCGCC GCCTGCCGCC GGCCACCTTC
GGCATTGCCC TGGCCACGGA GCCTGCGATT GCCGCCCTCA TGGGCATGCT GCTGCTGCAT
GAGCACCTGG TGGGCACCCA GTGGCTGGCT ATCGCCTGCA TCATGGGCGC GGCCATGGGC
AGCGCCATCA CGCGGCCCGC TGCGGCAGCC AAGGCGCCGG CCGAGGTGAC GCCTGCGGGT
TGA
|
|---|
| Protein sequence | MTTNTTWNRA WPLLAVLGSV TALGVGTSLA KQLFPVLGAQ GTSALRVGFA ALILVAIWRP
WRWTLARPQA WALLRFGVAL GAMNLLFYMA LRTIPFGLAV AIEFSGPLAV AIYHSRRPVD
FVWLALAVAG LALILPIGGV GAGGLVLEPV GIACAVGAAI CWALYILLGQ RLGSIPGGQA
VSLGLVFAAM VVVPFGVAEA GAKLLQPSIL AFGLVVAAIS SALPYTLEMM ALRRLPPATF
GIALATEPAI AALMGMLLLH EHLVGTQWLA IACIMGAAMG SAITRPAAAA KAPAEVTPAG
|
|---|
| |