Gene Daci_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2792 
Symbol 
ID5748368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3069861 
End bp3070739 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content73% 
IMG OID641297887 
Productperiplasmic binding protein 
Protein accessionYP_001563815 
Protein GI160898233 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.912226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCAT GGCGTCTCGC CCTGTGGGGC CTGGCGTTGG CACTGGCGCT GTCTGCGGCG 
CAGGCTGCCA TCCGGGTCAC GGACGGGCGG GGCGTTCCGG TGGAGCTGCC ACGGCCGCCG
CAGCGCATCG TCAGCCTGCT GCCCTCGCTG ACCGAGACCG TGTGCGAGCT GGGCGGCTGC
CAGCGCCTGG TCGGCGTGGA CCGCTATTCG AACTGGCCGG CCCATGTGAA GACCCTGCCC
GTGGTGGGCG GCGGCATGGA TCCCAACATC GAGGCCATCG TCGCGCTCAA GCCCGATCTG
GTGCTGGTGT CCATGGCCTC GCGCTCGGTG GCGCGGCTGC AGGCATTGGG CCTCAAGGTG
GTGGCGCTGG AGCCGCGCAC CCATGCCGAT GCGCAGGCCG TGCTGCGCAC CGTGGGCCGG
TTGCTGGACC TGCCGCCCGC GCAGGGCGCC GACCGTGTCT GGTCCGCCAT CGAGGCGCGC
CTGCAGGAGG TGGAGCGCAG CATGGCCCCC GCGCTGCGCG GGCAGACCGT GTATTTCGAG
GTCAACCGCG GCCCCTTTGC CGCCGGCGAG TCTTCGTTCA TCGGCGAGAC CCTGGCGCGC
CTGGGCATGC GCAACATCGT GGGAGCGCAG CTGGGGCCGT TCCCGCGCAT CAACCCTGAA
TTCGTGGTGC GCGCCGATCC GGACTTCATC CTGGGCGGCG ACCGCAGCCT GGGCACATCG
GGCGAGCCCT ATCCGGGCTG GGGCCGCATG CGTGCCATGC AGGCCGGGCG CGTCTGCCGC
TTTGTGCCGG CCGAGCTGGA CGTGCTGGTG CGCGCCGGCC CGCGCATGGC CGAGGGCGCT
GCGCTGATGG CGCGTTGCCT GAACGGGGCC GCACGGTGA
 
Protein sequence
MRPWRLALWG LALALALSAA QAAIRVTDGR GVPVELPRPP QRIVSLLPSL TETVCELGGC 
QRLVGVDRYS NWPAHVKTLP VVGGGMDPNI EAIVALKPDL VLVSMASRSV ARLQALGLKV
VALEPRTHAD AQAVLRTVGR LLDLPPAQGA DRVWSAIEAR LQEVERSMAP ALRGQTVYFE
VNRGPFAAGE SSFIGETLAR LGMRNIVGAQ LGPFPRINPE FVVRADPDFI LGGDRSLGTS
GEPYPGWGRM RAMQAGRVCR FVPAELDVLV RAGPRMAEGA ALMARCLNGA AR