Gene Daci_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2780 
Symbol 
ID5748356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3057975 
End bp3058289 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content70% 
IMG OID641297875 
Producthypothetical protein 
Protein accessionYP_001563803 
Protein GI160898221 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.198014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.363116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA GTCCCGCAGT GTCCGCGCCC GCGCAGGCTC CCTCGCACCC CGACGCCGGC 
AAGCCCTGGT GGAAGTTCGG CCATGTCTGG CTGGTGGTGG CCGGCCCGGC GGCCGTGGTG
GTCGCTGCCG TGATCACGGC CATCATCGCC ATCAATGGCG CCGATCCCGT GATCGACCCC
GACTACTACC GCAACGGCAT CACGATCAAC GAGCGTGCCG ATGGCGTGCG CGAAGTGCCC
AAGAGCATGG CGCCCGCCGT CACCGGCCGC AACCATGCGG CCACGCCCGC GCACGATCAC
CCCACGGATC GCTGA
 
Protein sequence
MSSSPAVSAP AQAPSHPDAG KPWWKFGHVW LVVAGPAAVV VAAVITAIIA INGADPVIDP 
DYYRNGITIN ERADGVREVP KSMAPAVTGR NHAATPAHDH PTDR