Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2716 |
Symbol | |
ID | 5748292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2986644 |
End bp | 2989025 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641297811 |
Product | hypothetical protein |
Protein accession | YP_001563739 |
Protein GI | 160898157 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.322654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGC GCGTGCAGTG CGAGCGCATC CGCGCTGCAC TTCGCGCTGC CTCCGGCGCA GCCGTCCCAC GTGCAGGCGT CTTGCCTCGA ACACGGCTGG CCTGCGGCCA TTGCCGTGTT CGCCGGTGCG CTGGCTGCTG GTGCAGCCTT GCCACCGGGC CGCAGTTGCC GGGATCGAGA ACCTGGGGGA CAGGGGGAGG CAAATGCGGA AGGCAAGACA AAAGGGGGCG GCACCTGTCG GCCCGCAAAG CCTGTCTGCA CGTGGGGGTG GCGCGGCACG GCGCGGCTTC GCCGCCGTGC CGCTTGGGGC GCGAGGCCCG CGCCGGTACA GGCATGTCCG CGTGCTTTGC ACGACCGGAC ACGCCACAGC CTTCAGGGAG CGCAGCCATG AGCAACCGCC GCGATGAAGA TTTCCGCATC CGCCCCAGCG CCCCGAAGAA CCGAGGCAAG GGCCAAGGTC AGAGCTTCGT TTCCAAGGTA CTCAAGCAGG CAGGCAAGGC CAGCAGCGGC AAGTCCTCAG TGCGCCGTCC AGGCGGAACC GGCAAGGGCG CGGACACCGG CCAGCGGCCC GGTTCGCGCC TGGGGCGCGG CCACACGGCG GCGCGCTTCG CGGGGGCGAA GCTCACGCCC ATGTCGCGGC GCGTGACCAT CAAGACGCTG CTGGTCAACC AGCGCCAGGC CAGCCCGCAG TCGCTCGCCA AGCACCTGCG CTACATCGAG CGCGATGGCG TGGGCCGCGA TGGCGAGCCG GGCCAAGCCT ACGGGCCGCA GACCGATGCC GCCGACCTCG ACGCCTTCAA GGAACGCTGC GCCGACGACC GACACCATTT CCGCTTCATC CTCTCGCCCG AGGATGGCGC CGAGCTGGAA GACCTGCGCA CCTACACGCG GCACCTCATG GGCCGCATGG AAGCCGACCT GGGCACGGGC CTCGATTGGG TGGCCGTCAA CCACTGGAAC ACCGACAACC CGCACACGCA CATAGTCGTG CGCGGGCGCG ACGACACCGG CAAAGACCTC ATCATTGCGG GCGACTACAT CGCCGATGGC TTCCGCCATC GCGCCGCCGA GCTGGCGACC GAATGGCTGG GGCCGCGCAC CGAGCTGGAG ATCCAGCAGA CCTTGCAGCG CGAGGTGAAG CAGGAGCGGT GGACGAGCCT GGATCGCACC CTGCAACGCG AGGCCGGCGA CGACGGCCGA GTGCAGATCG AACGCTTCAA CGAACCGAGA CTGCAACGCC AGCGCCTGTT GCTGGTTGGC CGGCTGCAAC GCTTGCAGCG CCTGGGCCTG GCCGACGAAA TGCAGCCCGG CACCTGGGCC GTCCACGCCG ACGCGGGAAA GACCCTGCGC ACCCTGGGCG AGCGTGGCGA CATCATCCGC ACCATGCAGC GGGCCATGCG CGGCGAGCCG CGCGAGCTGG CAGTGTTCGA GCCGGGCGAC GATGGCCGAA CCATTCTCGG GCGCGTAGCC GCGAAGGGGC TGGCCGACGA GCTGCGCGAC CGGGGCTATC TGGTCATCGA CGGCGTGGAC GGCAAGGCCC ACTACGTCGC GCTCAATGCC CGCGACGAGC TGGCGAACTA TCCGACCGGC GCCGTGGTGG CGGTGAAGGG ATCGGCCGAC GTGCGTGCGG CCGACAAGAA CATCGCCGCA CTGGCGAGCG GTGGCCTGTA CCGCACCGAC CATCATCTGG CCGTCGCGCA GGGGCAGACA GTGCCGGGCC GTGATCCGCA GGAAGTCGTC GCGGTCCACG TCCGCCGGCT GGAAGCCCTG CGCCGCGCCG GCATCGTGGA GCGCGTGGCC GAGGGACTTT GGAAGGTGCC GGACGACCTG GCCGAACAGG GCCGCCGCTA CGACGCGCAG CGTCTGGGCG GCGTGGCGGT GGAACTGAAA TCGCACCTGC CCATCGAGCG GCAGGCCCGC GTGATTGGGG CCACTTGGCT CGACCAGCAA TTGATCGGCG GCGGCTCGGG CCTGGGCGAC CTCGGCTTTG GCAGCGAGGC CAAACAGGCG ATGCAGCAGC GCGCCGACTT CCTGGCCGAA CAGGGATTGG CCGTGCGGCG CGGCCAGCGC GTGATCCTGG CGCGCAACCT GCTGGGCACA CTGCGCAACC GGGAACTGGC GCAGGTCGCC AAAGACATTG CGGCCGAAAC TGGCTTGGAG CATCGACCCG TGTCCGATGG GCAGCGCGTG GCCGGCATCT ACCGGCGCTC CGTCATGCTT GCCAGCGGGC GCTACGCGAT GCTCGATGAC GGCATGGGGT TCAGCCTGGT GCCGTGGAAA CCGGTGATCG AGCAGCGAAT GGGGCAGCAG CTTGCCGGGA CGGTGCGCGG CGGCGCGGTG TCATGGGAGA TTGGGCGGCA TCGGGGGCCA ACCATTTCTT GA
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Protein sequence | MSSRVQCERI RAALRAASGA AVPRAGVLPR TRLACGHCRV RRCAGCWCSL ATGPQLPGSR TWGTGGGKCG RQDKRGRHLS ARKACLHVGV ARHGAASPPC RLGREARAGT GMSACFARPD TPQPSGSAAM SNRRDEDFRI RPSAPKNRGK GQGQSFVSKV LKQAGKASSG KSSVRRPGGT GKGADTGQRP GSRLGRGHTA ARFAGAKLTP MSRRVTIKTL LVNQRQASPQ SLAKHLRYIE RDGVGRDGEP GQAYGPQTDA ADLDAFKERC ADDRHHFRFI LSPEDGAELE DLRTYTRHLM GRMEADLGTG LDWVAVNHWN TDNPHTHIVV RGRDDTGKDL IIAGDYIADG FRHRAAELAT EWLGPRTELE IQQTLQREVK QERWTSLDRT LQREAGDDGR VQIERFNEPR LQRQRLLLVG RLQRLQRLGL ADEMQPGTWA VHADAGKTLR TLGERGDIIR TMQRAMRGEP RELAVFEPGD DGRTILGRVA AKGLADELRD RGYLVIDGVD GKAHYVALNA RDELANYPTG AVVAVKGSAD VRAADKNIAA LASGGLYRTD HHLAVAQGQT VPGRDPQEVV AVHVRRLEAL RRAGIVERVA EGLWKVPDDL AEQGRRYDAQ RLGGVAVELK SHLPIERQAR VIGATWLDQQ LIGGGSGLGD LGFGSEAKQA MQQRADFLAE QGLAVRRGQR VILARNLLGT LRNRELAQVA KDIAAETGLE HRPVSDGQRV AGIYRRSVML ASGRYAMLDD GMGFSLVPWK PVIEQRMGQQ LAGTVRGGAV SWEIGRHRGP TIS
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