Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2695 |
Symbol | |
ID | 5748271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2963738 |
End bp | 2964493 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641297790 |
Product | conjugal transfer protein TrbJ |
Protein accession | YP_001563718 |
Protein GI | 160898136 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.833269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC ATGCCTCCAA ACTCGCCGCG CTGACCGCTG CTTGTGTGCT CGCCTTCGGC ATCGCGCAAC CCGCGCACGC CTTGTTCGGC GTCGGCGACA TCGTGCTCGA CCCGACCAAT CTTGTGCAGA ACACGCTCAC GGCGGTTCGC ACGCTGGAGC AGATCAACAA CCAGATCCGC CAGCTCCAGA ACGAAGCGCA GATGCTCATC AACCAGGCGC GCAATCTGGC CAGCCTGCCG TCCAGCGTGG TCGGCCAATT GCGCGCCAAT CTGGCGACCA CCCAGCGGCT GATCGCGCAG GCCAAGGGCC TGGCCTATGA CGTGACGAGC ATCGACCGGG AGTTCGCGCG CCTGTATCCC GAGAAGTACG CCGCCACTGT GAGCGGCAAT CAGATATACC TCGATGCGCA GGAGCGTTGG AAGAACACGC TCAACGGCCT GCAAACCACC ATGCAGATGC AGGCACAGGC GTCGCAGAAC CTGAGCGACG ACGAAAGCGT GCTGGCCGAC CTCGTGGGCA AGAGCCAGTC GGCCGAGGGT GCGTTGCAAG CGATGCAGGC CATGAACCAG TTGCTGGCCT TGCAGGCCAA GCAGTCGATC CAGACGCAGC GGCTTCAGAT CACGCAAGAC CGCGCGGCCT CGCTGGAGCT AGCGCGGCAA GCGGCGGCCA CGGAGCGCGG GCGCGAGGTG ACGCGCCGCT TCCTGGGCGA AGGCACGCCG TACACGCCGC AGCCCGTCAA TTTCTACAAC CGCTGA
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Protein sequence | MKTHASKLAA LTAACVLAFG IAQPAHALFG VGDIVLDPTN LVQNTLTAVR TLEQINNQIR QLQNEAQMLI NQARNLASLP SSVVGQLRAN LATTQRLIAQ AKGLAYDVTS IDREFARLYP EKYAATVSGN QIYLDAQERW KNTLNGLQTT MQMQAQASQN LSDDESVLAD LVGKSQSAEG ALQAMQAMNQ LLALQAKQSI QTQRLQITQD RAASLELARQ AAATERGREV TRRFLGEGTP YTPQPVNFYN R
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