| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2693 |
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| Symbol | |
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| ID | 5748269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2962051 |
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| End bp | 2963403 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297788 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001563716 |
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| Protein GI | 160898134 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.300912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG TGACGGTCAT CGACCGCTTC CTCGACACCT TCTCGCGCTA CATCGACTCG
GGCTTTGGCC TGTTGCACGG CGAAGTGGCG TTTCTGACCG CCACGCTGAT CGTCATCGAC
ATGACGCTCG CCGGGCTGTT CTGGGCGATG AGCCATGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGATCCGCAA GGTGCTGTAC GTCGGCGCCT TCGCCTACAT CATCGGCAAC
TTCAACTGGT TGGCTGGCAT CGTGTTCCGC TCCTTCGCCG GGCTGGGCCT GACGGCCAGC
GGCTCGACCC TGAGCATGGA GAACTTCCTG CAACCGGGCC GGCTGGCGAA GGTCGGCATC
GACGCCGGTG CGCCGATCCT GAAACAGATC GGCGACATGG CGGGCTTCCC CGAAGTCTTC
GTGAACATCA CGCCCATCGT CGTGATGTTC CTCGCTTGGC TGATCGTCCT GCTGTGCTTC
TTCGTGCTGG CGATCCAGCT TTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTTGCC
GGCTTCGTGC TGGTGCCGTT CGCGCTCTGG AACAAGACCG CATTTCTCGC CGAGAAGGTG
CTGGGCAACG TGGTGTCGTC CGGCATCAAG GTGCTGGTGC TGGCGGTGAT CGTGGGCATC
GGCTCGGGCC TGTTCGCCGA GTTTCAGGTA CAGCCCGCCG AACCATCCAT CGACCACTCC
GTGGTCGTGA TGCTGGCCTC GCTGACGCTG CTGGCCTTGG GCATCTTCGG GCCGGGCATT
GCAACCGGGC TGGTGTCCGG CGGCCCGCAG CTCGGCGCAG GTGCGATGGC CGGTGCGGCG
CTGGGCGCGG CCGGCGCTGC TGTTGCCGTG GGCGCTGCGG CTACGGGCGT CGGCGGCGCA
GTCGCCGCCG GGGCGCGCAT GGCGCCCGCA GCCGCCAAGC TGGCCGGTAG CGGAGCGCGT
GCCGCCACTG GGGCCGCCAG CAGCGCGCGG TCGGCGTTTC AGGCGGGTTC TGCATCCGCC
GGCGGCGGCC TCAAGGGCGC TGCCGCTGGT GTCGGCAATG TCGCCAAGAC CGGCGCGCAG
GCGACCGGGC AGAAGGTGGC TGAGGGCGCG CGCTCGATGA AGGAGCGTGT CGCCGCCGCC
TTCCGGCCCG ATGACGCCGG ATCGGCGTCA GGGGGCGGTG CCGCACAGGC TGCAAACGAG
CCAACCCCAT CCACCGCGCA ACCCGCCTGG GCCAAGCGCC TGCATCGCAG GCAGCAGCTC
ACCCATGCCG CGACGACCGC CGCCCACACG CTGCGCGGCG GCGATTGCGG CAGCTCCAGC
CAAGGCCCGA GCCTGCGCGA TTCCGATTCC TGA
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| Protein sequence | MNDVTVIDRF LDTFSRYIDS GFGLLHGEVA FLTATLIVID MTLAGLFWAM SHATGQGEDV
IAKLIRKVLY VGAFAYIIGN FNWLAGIVFR SFAGLGLTAS GSTLSMENFL QPGRLAKVGI
DAGAPILKQI GDMAGFPEVF VNITPIVVMF LAWLIVLLCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTAFLAEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQV QPAEPSIDHS
VVVMLASLTL LALGIFGPGI ATGLVSGGPQ LGAGAMAGAA LGAAGAAVAV GAAATGVGGA
VAAGARMAPA AAKLAGSGAR AATGAASSAR SAFQAGSASA GGGLKGAAAG VGNVAKTGAQ
ATGQKVAEGA RSMKERVAAA FRPDDAGSAS GGGAAQAANE PTPSTAQPAW AKRLHRRQQL
THAATTAAHT LRGGDCGSSS QGPSLRDSDS
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