| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2691 |
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| Symbol | |
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| ID | 5748267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2960330 |
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| End bp | 2961331 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297786 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_001563714 |
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| Protein GI | 160898132 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.239793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATC TTTTCCGTAA ATCCGCCTTG CCGGTGATGC TTCTGGCTTC GACCGTGCTG
TTCTCTGGCT GCGCTACTCA GGGCAAGCCG CCACCGACCA TTTCGCTCGA TGAGCCGGTG
CAGGCCCAGC CGCTGCCGGA GCCACCAAAA CCGGTGGAGG TGGTCACGGT GCCGCAGCCG
CTCGCGCTGC CGTCGCAGTT GAAACCACTG CCAGAGACCG AGGAGGCCAA GCCCGCGCCG
GAACCCGCGG ATGAGAAAGT GCGCGTCTCG CGCGCCAATG CCGAGGCCCG TGTCGCGCCC
ACGCGCGAAG GCTACGTCAA CGCGATCCAG GTCTGGCCCT TTACCGATGG CGCGCTTTAC
CAGCTCTACG CGGCCGTGGG CCGCGTGACG GTGGTTTCGC TGCAGCCCGG CGAGGAACTG
GTGACGGTCG CGGCCGGCGA CACGGTGCGC TGGATCGTCG GGGACACGTC GAGCGGCAGC
GGTGAGGCTC TGCGCGTCAA CGTGATGGTC AAGCCGATCC GCTCGGGCTT GAAGACCAAT
CTGGTCATCA CCACCAGCCG CCGGACGTAT CTGCTGGAGC TGACTTCGAC CGAAAAGACG
TGGATGGCGT CGGTGTCCTG GGAGTACCCG AAGGACAAGA TGCTGGCCTT GCAGCGCCAG
GCGCAGGCGG CCAGCGCCGC CGCCCCGGTC GATAGCGGCC TGTCGCTGGA GAAGATCCGT
TTCCGCTATG CCATCAGCGG CAGCAATCCG CCGTGGAAGC CGCTGCGTGC TTTCGATGAC
GGCGAGAAGG TCTACATCCA GTTCCCGCCC GGCATCGCCC AGGGCGAGCT GCCGCCGCTG
TTCGTGATCG GCGCGCAAGG CGACGGGCAA CTGGTGAACT ACCGATTCCG TGCGCCGTAC
TACATCGTTG ATCGCCTGTT CGGCGCGGCC GAACTGCGCC TGGGCGGGGA CAAAGGCGAC
GTGGTGCGGA TTGAGCGCAC GGACGGCACA CGGAGGAACT GA
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| Protein sequence | MNDLFRKSAL PVMLLASTVL FSGCATQGKP PPTISLDEPV QAQPLPEPPK PVEVVTVPQP
LALPSQLKPL PETEEAKPAP EPADEKVRVS RANAEARVAP TREGYVNAIQ VWPFTDGALY
QLYAAVGRVT VVSLQPGEEL VTVAAGDTVR WIVGDTSSGS GEALRVNVMV KPIRSGLKTN
LVITTSRRTY LLELTSTEKT WMASVSWEYP KDKMLALQRQ AQAASAAAPV DSGLSLEKIR
FRYAISGSNP PWKPLRAFDD GEKVYIQFPP GIAQGELPPL FVIGAQGDGQ LVNYRFRAPY
YIVDRLFGAA ELRLGGDKGD VVRIERTDGT RRN
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