Gene Daci_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2686 
Symbol 
ID5748262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand- 
Start bp2956904 
End bp2957512 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content57% 
IMG OID641297781 
ProductTetR family transcriptional regulator 
Protein accessionYP_001563709 
Protein GI160898127 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0616794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCC ATCCAAAGCA TCTGCCGGCC GATGAACGTC GTGCCGTAAC TGTCGAGTCC 
GTCGTGGCGC TTGCCGGTTC ACAAAACCCA AGCGAGATAA CCACTGCAGC TATCGCTAAA 
CACATGAACT TGACCCAGGG TGCGCTGTTT CGGCACTTCC CGAACAAGGA AGCCATTTGG 
CAGGCGGTCA TGGAGTGGGT AGCAGAGCGC CTATTAGCCA GAATCGATCG ATCCGCACAA 
GGAATCGAGT CGCCCTTGGC AGCCATGGAG GCGATGTTCA TGAGTCATAT CGAATTCGTA 
GCTGAGCACC CAGGCGTGCC AAGAATGATG TTTGGTGAGC TTCAGCGTGC CGAATCGACA 
CCGGCCAAGC GCATGGTGCA AACCTTGATT CAGCGCTACG GCGAACGTTT GCATCGTCTC 
ATCGAGAAAG GCAAGGCCAG CGGCGAGTTG TCTCCCTCGC TTGACAACGA GGCGGCGGCA 
ACGCTGTTCA TTGGCACGAT CCAGGGCTTG GTCATGCAAT CGCTGTTGGC GGGTGATGTG 
GGACGTATGC ACGGCGATGC GCCGCGCGTC TTTGCAATTT ATCGGCGTGG CATAAGGAGT 
GCGCAATGA
 
Protein sequence
MDTHPKHLPA DERRAVTVES VVALAGSQNP SEITTAAIAK HMNLTQGALF RHFPNKEAIW 
QAVMEWVAER LLARIDRSAQ GIESPLAAME AMFMSHIEFV AEHPGVPRMM FGELQRAEST 
PAKRMVQTLI QRYGERLHRL IEKGKASGEL SPSLDNEAAA TLFIGTIQGL VMQSLLAGDV 
GRMHGDAPRV FAIYRRGIRS AQ