| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2654 |
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| Symbol | |
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| ID | 5748230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2918298 |
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| End bp | 2919851 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641297749 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001563677 |
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| Protein GI | 160898095 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0657589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA CGATCCGCCA GCAGGACCTG ATCGATTCGA TCGCAGGCGC CCTGCAGTAC
ATCAGCTACT ATCACCCCGC CGACTACATC GCCCACCTGG CCCGCGCCTA CGAACGCGAG
CAGAGCCCGG CGGCCAAGGA CGCGATGGCC CAGATCCTGA CCAACTCCAA GATGTCGGCC
ACCGGCCACC GCCCGATCTG CCAGGACACC GGCATCGTCA ACGTGTTCCT GAAGGTGGGC
ATGGACGTGC GCTGGGAAGG CTTCACGGGC GGCCTGGAAG ACGCCATCAA CGAAGGCGTA
CGCCGCGGCT ACAACCACCC CGAGAACACG CTGCGTGCCT CGGTCGTGGC CGATCCGCTG
TTCGCCCGCA AGAACACCAA GGACAACACG CCTGCCGTCA TCAACGTGCA GATCGTGCCC
GGCGACAAGC TGGACGTGAC CGTGGCCGCC AAGGGCGGCG GCTCGGAGAA CAAGTCCAAG
ATGATCATGA TGAACCCCAG CGACAACCTG GTGGACTGGG TTCTCAAGAC TGTTCCGACC
ATGGGCGCGG GCTGGTGCCC GCCGGGCATG CTGGGCATCG GCATCGGCGG CACCGCCGAG
AAGGCCGTGC TGCTGGCCAA GGAAAGCCTG ATGGAAGACC TGGACATGTA CGAGCTGCAG
GCCAAGGCCG CGCGCGGAGA AAAGCTCGAC CAGGTCGAGG AACTGCGCCT GGAGCTGTAC
GAGAAGGTCA ACGCCCTGGG CATCGGCGCG CAAGGCCTGG GCGGCCTGGC CACCGTGCTG
GACATCAAGA TCAAGATGTA CCCCACGCAC GCGGCCTCCA AGCCCGTGGC CATGATCCCC
AACTGCGCGG CCACTCGCCA CGCGCACTTC GTGATGGACG GCTCCGGCGC GGTCTACATG
GACGCGCCCT CGCTGGACCT GTGGCCCAAG ATCGACTGGG AGCCCGACTA CAACAAGTCG
CGCCGCGTGG ACCTCAACGC ACTGAGCAAG GAAGAAGTGG CCAGCTGGAA GCCCGGCGAC
ACCCTGCTGC TCAACGGCAA GATGCTCACG GGCCGCGATG CCGCCCACAA GCGCATCCAG
GACATGCTGG CCAAGGGCGA GAAGCTGCCC GTGGACTTCA CCAACCGCGT GATCTACTAC
GTCGGCCCCG TGGACCCGGT CAAGGACGAA GCCGTGGGCC CCGCAGGCCC GACCACGGCC
ACCCGCATGG ACAAGTTCAC CGACATGATG CTGGAGCAGA CCGGCCTGAT CGCCATGATC
GGCAAGGCCG AGCGCGGCCC GGTGGCCATC GAGTCCATCA AGAACCACAA GTCGGCCTAC
CTGATGGCCG TGGGCGGTGC CGCCTACCTG GTGTCCAAGG CCATCAAGAA CGCCAAGGTC
GTGGGCTTCG AGGACCTGGG CATGGAAGCC ATCTACGAAT TCGACGTGGT GGACATGCCC
GTGACCGTCG CCGTGGATGC CGGCGGCACC AGCGCCCACA TCACCGGCCC TGCCGAATGG
CAACAGCGCA TTGCATCGGG CGAGTTCAAG ACCATTGAGA TCGCCTCGGC CTGA
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| Protein sequence | MTTTIRQQDL IDSIAGALQY ISYYHPADYI AHLARAYERE QSPAAKDAMA QILTNSKMSA
TGHRPICQDT GIVNVFLKVG MDVRWEGFTG GLEDAINEGV RRGYNHPENT LRASVVADPL
FARKNTKDNT PAVINVQIVP GDKLDVTVAA KGGGSENKSK MIMMNPSDNL VDWVLKTVPT
MGAGWCPPGM LGIGIGGTAE KAVLLAKESL MEDLDMYELQ AKAARGEKLD QVEELRLELY
EKVNALGIGA QGLGGLATVL DIKIKMYPTH AASKPVAMIP NCAATRHAHF VMDGSGAVYM
DAPSLDLWPK IDWEPDYNKS RRVDLNALSK EEVASWKPGD TLLLNGKMLT GRDAAHKRIQ
DMLAKGEKLP VDFTNRVIYY VGPVDPVKDE AVGPAGPTTA TRMDKFTDMM LEQTGLIAMI
GKAERGPVAI ESIKNHKSAY LMAVGGAAYL VSKAIKNAKV VGFEDLGMEA IYEFDVVDMP
VTVAVDAGGT SAHITGPAEW QQRIASGEFK TIEIASA
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