Gene Daci_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2606 
Symbol 
ID5748176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2877100 
End bp2877681 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID641297695 
Productprophage LambdaSo, lysozyme, putative 
Protein accessionYP_001563629 
Protein GI160898047 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00071357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.49737e-16 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCACGG CCCGCATGCC AGCGGCAGGA CTGGGCATTG GCGCGGCCAT TCTCGCGGCC 
TGGATTGCCG CAGAAGGCTT CAGCGCAGAT CCGATCATCC CGGTTCGCGG CGATGTGCCC
ACCATCGGCC ACGGCGCCAC GCGCTACGAG GACGGCACAC GCGTGACCCT GGCCGACCCG
CCCATCACCC GCGAACGGGC GCGCGAGCTG GCCATCAACC TGCTGGAGCA GCAGTACGGC
GCCTGCGTGC GCGATTCGCT GGGTGACACG CGAGTGCACC CGGCCGAGTT CGCCCAGGCG
GTGGACTTCG CAGGCCAATA CGGCTGCGGG GCCTGGCGCG GCTCCTCGAT GCTGGCCAGG
ACACGGGCCG GCGACTACGC CGGCGCCTGC CAGTCCTACC TGTCCTGGCG ATTCATGACC
AGCACCCAGC CTTTGCAGGG CTTCAGCGCC TATCGATGGG ATGGCGCAGG CCGGCCCGCG
CGCTGGCGCT TTGACTGCTC GGCACCCGGC AACAAGGTAT GCCGCGGCGT GTGGACACGC
CAGCAGGCGC GCCACGCGGC CTGCATGGAG GCCCAGCCTT GA
 
Protein sequence
MSTARMPAAG LGIGAAILAA WIAAEGFSAD PIIPVRGDVP TIGHGATRYE DGTRVTLADP 
PITRERAREL AINLLEQQYG ACVRDSLGDT RVHPAEFAQA VDFAGQYGCG AWRGSSMLAR
TRAGDYAGAC QSYLSWRFMT STQPLQGFSA YRWDGAGRPA RWRFDCSAPG NKVCRGVWTR
QQARHAACME AQP