Gene Daci_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2577 
Symbol 
ID5748147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2853308 
End bp2853715 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID641297666 
ProductXRE family transcriptional regulator 
Protein accessionYP_001563600 
Protein GI160898018 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0918178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000133769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCACC TGTTGCAACT GCCCGATCAG CTTGCGCTGC ACCTGAAGTC GCTGCGCAAG 
GCCGCTGGCG TGAGCCAGGC CCAACTGGCA CAGCGGCTGG GCGTGTCCCA GTCGCGTGTG
GCGGCGATAG AGCGTGACCC GGCCGCCATC AGCGTGCGCC AGCTGATGGA GATCCTGCAG
CTGCTGGATG CCGATCTGCT CATGCGGCCC AGGGCGGATG CGGTGGCTTC TCCTGCGTCT
GCACCTATGT CTGTGCCTGC GCCTGCTGCG TTGAGGGTGG CCGAGCCAGC TCCACAACCG
TACGCGGGTG ACAACGTGCC CCGCAAGCCC GCCGACCGCC CCGTGGCCTT CAAGCCGCAG
GCGCTGCCGC CGCACTGGCA GGACCGCAAG CCGAAAGGGT CCTGGTGA
 
Protein sequence
MDHLLQLPDQ LALHLKSLRK AAGVSQAQLA QRLGVSQSRV AAIERDPAAI SVRQLMEILQ 
LLDADLLMRP RADAVASPAS APMSVPAPAA LRVAEPAPQP YAGDNVPRKP ADRPVAFKPQ
ALPPHWQDRK PKGSW