Gene Daci_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2552 
Symbol 
ID5748121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2825821 
End bp2826603 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID641297640 
ProductABC transporter related 
Protein accessionYP_001563575 
Protein GI160897993 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.94553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCA CAGAGGATCT GACCATCCGC TTCGGGGGCC ATGTGGCCGT CAACGGCGTG 
AGCTGCGCTT TCGAGCCGGG CACGCTGACG GCCATCGTGG GGCCCAACGG GGCGGGCAAG
ACCACGTATT TCAACCTGAT CTCCGGGCAG CTCAAGGCCA CGGCCGGGCG CGTGCTGCTG
GGCGGGCGCG AGCTGACGGG GTTGGCCCCT TCGGCGCGCA CGCGCGCCGG GCTGGGGCGG
GCGTTCCAGC TCACCAATCT GTTCCCGCAC CTGAGCGTGC TGGAGAACGT GCGCCTGGCC
GTGCAGGCGC GCGACGAGGG CCCGCACCGG CGCGGCCTGA ACCTGTGGAG CATCTGGAGC
GACCACCGGG CATTGACGCA GCGGGCGCTG CACATCCTCG ACCAGGTGGC CCTGTCCGCC
CGGCGCGATG AGGCCGTGGC CGCGCTGCCG CATGGCGACC AGCGCAAGCT GGAGGTGGCC
TTGCTGATGG CGCTGGAACC CCAGGTCTAT ATGTTCGACG AGCCCACGGC GGGCATGAGC
CATGACGAGG CGCCGGTGAT CCTGGACCTG ATACGCAAGC TCAAGCAGGA CCGCAGCAAG
ATCATCCTGC TGGTGGAGCA CAAGATGGAT GTGGTGCGCG AGCTGGCCGA CCGCATCATC
GTGCTGACCA ATGGCACGCT GGTGGCCGAT GGGCCGCCGG CCGAGGTCAT CGCCTCGCCT
GTGGTGCAGC AGGCCTACCT GGGTGTGGTG CCGGAGCAGG GCGCTGTGAA GGAGGCCGCA
TGA
 
Protein sequence
MLRTEDLTIR FGGHVAVNGV SCAFEPGTLT AIVGPNGAGK TTYFNLISGQ LKATAGRVLL 
GGRELTGLAP SARTRAGLGR AFQLTNLFPH LSVLENVRLA VQARDEGPHR RGLNLWSIWS
DHRALTQRAL HILDQVALSA RRDEAVAALP HGDQRKLEVA LLMALEPQVY MFDEPTAGMS
HDEAPVILDL IRKLKQDRSK IILLVEHKMD VVRELADRII VLTNGTLVAD GPPAEVIASP
VVQQAYLGVV PEQGAVKEAA