| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2494 |
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| Symbol | |
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| ID | 5748057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2755128 |
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| End bp | 2756066 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297576 |
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| Product | extradiol ring-cleavage dioxygenase class III protein subunit B |
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| Protein accession | YP_001563517 |
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| Protein GI | 160897935 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.264128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.98299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACT CCCACGCTCC CCACTCTCCC CGGCTTTCCT CCGCCGCCGG TGCCCGGCTG
CCCGTGCTCT ATGTCTCCCA CGGCTCGCCC ATGTTCGCGC TGGAGCCGGG TGAAACCGGC
CCTGTGCTCG CGCAATGGGG CAGGGCGCTG CGCCAGGCCC ACGGCCCGCT GCGCGGCGTG
GTCGTCATGT CGCCGCACTG GATGTCGCAC GGCGTGGAAG TCATGACAGG CGCCACGCCC
ACCACCTGGC ATGACTTCGG CGGCTTTCCG CCCGCGCTCT ACCAACTGCA GTACCCGGCC
CCCGGCGCGC CCCAGCTGGC GCAGGAAGTC ATGGACCGCC TGCAGGCCGC AGGCATTGCC
TCCACCGCCA ACGCGCAGCG GCCCTTCGAC CACGGCGCCT GGGTGCCGCT GATGCATTTG
CTGCCGGATG CCGACCTGCC CGTGGTGCAG CTGTCCCTGC CCGCCTCGGC CGGGCCGGCC
GAAACCCATG CGCTGGGCGC GGCCCTGGCG GGGCTGCGCG ATGAGGGCGT GCTCATCGTC
GGCTCCGGCA GCATGACGCA CAACCTGGGC GAATTCCGGG GCGGCACGGG CGAGGCCACG
GTGCGGGTGG ACGACGCCGT CCAGGCCCTG CGCAGCCAGG ATGGCCTGCA GGACGACCAT
GCCGTCGGCG GCTCCAGCGC CTCCTCGCCC TACGTGCAGG ATTTCAGCCG CTGGATCGAA
TCGCGCCTGC AGGCGCAGGA CCTGCCCGCG CTGCTGGACT ACCGCGCCCG CGCGCCTTCG
GCCCGGCGCG CCCATCCCAG CGAGGAGCAC TTCATGCCGC TGTACTTCGC GCTGGGCGCG
GCTGGCGCCA TGGCGCGGCC ACGGTATCTG AGCCGCGAAG TCATGTATTC CATCCTGGCC
ATGGATGCGA TGGCCTTCGA GGACGCGCAG GCGGCATAA
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| Protein sequence | MQDSHAPHSP RLSSAAGARL PVLYVSHGSP MFALEPGETG PVLAQWGRAL RQAHGPLRGV
VVMSPHWMSH GVEVMTGATP TTWHDFGGFP PALYQLQYPA PGAPQLAQEV MDRLQAAGIA
STANAQRPFD HGAWVPLMHL LPDADLPVVQ LSLPASAGPA ETHALGAALA GLRDEGVLIV
GSGSMTHNLG EFRGGTGEAT VRVDDAVQAL RSQDGLQDDH AVGGSSASSP YVQDFSRWIE
SRLQAQDLPA LLDYRARAPS ARRAHPSEEH FMPLYFALGA AGAMARPRYL SREVMYSILA
MDAMAFEDAQ AA
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