Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2486 |
Symbol | |
ID | 5748049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2747099 |
End bp | 2749366 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641297568 |
Product | hypothetical protein |
Protein accession | YP_001563509 |
Protein GI | 160897927 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.835018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAC CCGCCGTGCC CACAGCACGC ACCACGGCCC GCTCAACTTC CCACGCCGGT GCCCTGCGCC TGAGCGTGCT GGGCCTGGCC TCCGCCCTGG CGCTGAGCGC CTGCAACGAA TCCCAGGACA AGCCCCCGCA GGCCGCCAGC GCGCCGCTGC CCACCGAAAG CGCCCAGCCC GTCGCCACGC CCGTGGCCTA TGTGCCGCCT TCGGCCGAGA CGCTCTACCA GATGGTGGCG CCCATTGCGC TGTACCCCGA CAAGCTCGTG GCCCAGGTGC TGGCTGCCTC CACCTATCCC GACCAGGTCG GCGCCGCCGA GGTGTGGATG GGACAGAACC CCGGCCTCAA GCCCGAGGAA CTGCAAAACG CCGTCAACAG CCAGGACTGG GACCCTTCGG TCAAGTCGCT GACGCAGTTT CCCAATGTGC TGGCACAGCT GTCATCCAAC GTTCCCTGGA CCACGGCCCT GGGCAAGGCC TACTACAACG ATCCGGCCGA TGTGATGAAC GCCATCCAGG TGATGCGCCA GCGCGCCTAC AAGGCCGGCA CGCTCAAGGA CTCCAGCCGG CTCAAGGTGG CCGTGGCCAC GGCCGATGCC CCGCCCCCCG TGCCCCAGCC CGCACCGCAG GCCGTGGGCG AGCCGCTGTC GTCCATGCTG CCCGTGCCGG TGATCGACAC GCCGCCGCAG TTCATCGAGA TCGCACCTGC CCAGCCTGAC ACCGTCTATG TGCCGCAGTA CGACCCGGGC GTGGTCTATG GCGAGCCCGT GCCGATGTAC GGCGGATACC GCCCCATCGT GGCGCCGCAA CCCGTATACG TGGGCAGTTC GGCCGCGCCC GTGGTGGCGG GGCTGATCGG CTTCGGCGCA GGCGTGATCC TGGCCGAGTC CGTGGACCGC CGCCCCTGGG GCTGGAACTC CTGGGGCATG CGCTGGGGCG AGCCCGGCTA CCGCTGGCAC CGCAACGAAC CGCCGCCACC GCCATCGCGC CGCCCGGCCG TGATCTACAA CAACAACACC TACGTCTCGC GCTCGACCAC GGTGGTGCAG AACATCCACA ACACGCGCAT CAACAACGTT GGCAACGTCA CCAACATCGC GAACAACCCG CACTTCGAGC CGCGCCGCCC TGACTTCCCG CAGCAGGGCG GTGATCCTCG CCCGGGCGAC CCGCGCTCCG GTGATCCTCG TTCTGGTGAC CCACGTTCAG GCGGCATGGC CGCTGCGGCC CTGGCCGGTG CCGCAGGCAT GGCCGGCGCC GCCGCAGCAG CGCACTCCGG CATGCCCCAA CGCCTGGGCC TGAGGCCGCC GCAAGGCGGC CCGCCCCCGT CCGCCGAAGG CGTGGTGCCG CCCGGCGGCG CCCAGGGCTT TGCCCGGCAC GATGGCGCAG ATCGCGGACG CCCGGGCCTC AGGCCCGATG ACCGGCCCCA GGCCTCGCTG CAGCCCCGGA TGAACCCGGT GCCGGCCTCG CAGCCGGGCC AGTTCGGCAA GTGGCCTCAG TCCCCTCAGG CTGCGCAATC GGCCCCCTCA TCCCCACCGG GCGCCGCGCA GCGACCCGCG CCAGCACTGC CTGCGGCAGC CATGCAGGGT GACAGGGGCC GCGACTCCCG CGTGCCTTCC TGGTCTTCCG CAGCCACGCA GCAGGGCATG AGGCCACAGG ACAGGCAGAA CAGCCTGGAC AGGCAGGACC GCGACCGCTC CATGGCCGAT GCAGCGCGCC AGCGCCAGCA GCAACAGCAG CAAATGGAGA CGCAGGCCGC CCGCCTTCGC GGCGAGGAAC AGGCGCGCCA GCAACAGCAG CGCCAGGCCC AGATGCAGGC CCAGGCGCAG ATGCGGGATC AGGCGCGTGA CCAGGCCCAG GTTCAGGCGC AAGCCCAGGC CCGGCAACAG GCCGAGCGCG ATCGCCAGGC CTTGCAGCAG CGCTCCCAGG ACCAGGCGCG CCAGCAGCAA ATGCAGCAAC AAATGCAGCA GCAGCAGCAA CAACAGCAGC AGGCACGCGC ACAGGAGCAG ATGCAGGCCC AGCAGCAGGC GCAAAGACAG GCCCAGATGC AGGAGCGGCA GGCGCAGCAG CAAAGACAGC AGCAGTTCGA GGCTGCCCAG CAGCAACGCA TGCAGGCCCA GCAAGCACAG CAGGCCCAGG CACAGGCGCG TGCCCAGCAG CAGCAGGCCC GCGCGCAGCA GGAGCAACGC CAGCAACAGC AGCGCATGGC CAACGCGGCC CGCCCACAGG AGCGACGCGG CGGGCGCGAC GAGCGCCGGG ACCGTTGA
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Protein sequence | MLQPAVPTAR TTARSTSHAG ALRLSVLGLA SALALSACNE SQDKPPQAAS APLPTESAQP VATPVAYVPP SAETLYQMVA PIALYPDKLV AQVLAASTYP DQVGAAEVWM GQNPGLKPEE LQNAVNSQDW DPSVKSLTQF PNVLAQLSSN VPWTTALGKA YYNDPADVMN AIQVMRQRAY KAGTLKDSSR LKVAVATADA PPPVPQPAPQ AVGEPLSSML PVPVIDTPPQ FIEIAPAQPD TVYVPQYDPG VVYGEPVPMY GGYRPIVAPQ PVYVGSSAAP VVAGLIGFGA GVILAESVDR RPWGWNSWGM RWGEPGYRWH RNEPPPPPSR RPAVIYNNNT YVSRSTTVVQ NIHNTRINNV GNVTNIANNP HFEPRRPDFP QQGGDPRPGD PRSGDPRSGD PRSGGMAAAA LAGAAGMAGA AAAAHSGMPQ RLGLRPPQGG PPPSAEGVVP PGGAQGFARH DGADRGRPGL RPDDRPQASL QPRMNPVPAS QPGQFGKWPQ SPQAAQSAPS SPPGAAQRPA PALPAAAMQG DRGRDSRVPS WSSAATQQGM RPQDRQNSLD RQDRDRSMAD AARQRQQQQQ QMETQAARLR GEEQARQQQQ RQAQMQAQAQ MRDQARDQAQ VQAQAQARQQ AERDRQALQQ RSQDQARQQQ MQQQMQQQQQ QQQQARAQEQ MQAQQQAQRQ AQMQERQAQQ QRQQQFEAAQ QQRMQAQQAQ QAQAQARAQQ QQARAQQEQR QQQQRMANAA RPQERRGGRD ERRDR
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