Gene Daci_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2468 
Symbol 
ID5748031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2727183 
End bp2728352 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID641297550 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001563491 
Protein GI160897909 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.178118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.235606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCGCG CCCCGTCCGC ACGACCCGGC TCCTCCAGAA GGCACTCCAT GAACAACTCC 
ACGTCCCCCG TGCCCATCTC GCCGGTGGAA GACATCATTG CCGACATGCG CGCGGGCCGC
ATGGTCATCC TCGTCGATGA GGAAGACCGC GAGAACGAAG GCGACCTGGT GCTGGCCGCC
GACCATGTCA CCCCCGAGGC GATCAACTTC ATGGCGCGTT TCGGCCGCGG CCTGATCTGC
CTGACGCTCA CGCGCGAGCG CTGCGAATAC CTGAAGCTGC CGCCCATGGC CGCGCGCAAC
GGCACCGTGT ACAGCACGGC CTTCACCGTC TCCATCGAAG CGGCCGAGGG CGTGACCACC
GGCATCTCCG CCGCCGACCG CGCGCGCACC GTGCAGGCCG CCGTGGCCAA GGACTCCAAG
CCCACGGACC TGGTCCAGCC CGGCCACATC TTCCCGCTGC AGGCCGTCGA CGGCGGCGTG
CTCATGCGCG CCGGCCATAC CGAGGCCGGC TGCGACTTCG CCGCCCTGGC CGGCTGCAGC
CCCGCCGCCG TGATCTGCGA GATCATGAAG GACGACGGCA CCATGGCCCG CCTGCCCGAC
CTGCAGCTGT TCGCTGCCGA GCACGGCCTG AAGATCGGCA CCATCGCCGA CCTGATCCAG
TACCGCAGCC GCAACGAATC CCTGCTCAGC AAGGTCGGCA CGCGCCCGCT GCAGACGGCG
CATGGCGAGT TCATCGCCCA TGCCTTCCGC GACCTGCCCA GCCAATCCGT GCACCTGGCC
CTGGTCAAGG GCCAGTGGGA GGCCGACACC CCCGTGCCCG TGCGCGTGCA TGAGCCGCTG
TCCGTGCTGG ACGCGCTGGA GACCGGCCGC ACCCTGCACT CCTGGAGCCT GGACTCCAGC
CTCGAATACA TCGCCCGCCA GGGCCACGGC GTGGCCGTGC TGCTCAACTG CGGCGAGACC
GGCGACCAGC TGATGGCCCA GTTCGACGGC AGCGCCCGTG CCGCCCAGGC CCCCGAGCGC
GGCCGCATGG ACCTGCGCAC CTATGGCGTG GGCGCGCAGA TCCTGCGCGA ATGCGGCGTG
CAGCGCATGC AGCTCATGGG CCAGCCGCGC CGCCTGCCCA GCATGGCCGG CTACGGCCTC
GAAATCAGCG GCTACATCCC CAAGGAATAA
 
Protein sequence
MCRAPSARPG SSRRHSMNNS TSPVPISPVE DIIADMRAGR MVILVDEEDR ENEGDLVLAA 
DHVTPEAINF MARFGRGLIC LTLTRERCEY LKLPPMAARN GTVYSTAFTV SIEAAEGVTT
GISAADRART VQAAVAKDSK PTDLVQPGHI FPLQAVDGGV LMRAGHTEAG CDFAALAGCS
PAAVICEIMK DDGTMARLPD LQLFAAEHGL KIGTIADLIQ YRSRNESLLS KVGTRPLQTA
HGEFIAHAFR DLPSQSVHLA LVKGQWEADT PVPVRVHEPL SVLDALETGR TLHSWSLDSS
LEYIARQGHG VAVLLNCGET GDQLMAQFDG SARAAQAPER GRMDLRTYGV GAQILRECGV
QRMQLMGQPR RLPSMAGYGL EISGYIPKE