Gene Daci_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2429 
Symbol 
ID5747992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2683756 
End bp2684742 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID641297511 
Productmalate dehydrogenase 
Protein accessionYP_001563452 
Protein GI160897870 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01759] malate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AGCCCGTTCG TGTCGCCGTC ACCGGTGCCG CCGGTCAAAT TGGTTACGCC 
CTGCTGTTCC GCATCGCCTC CGGCGAAATG CTGGGTAAGG ACCAGCCCGT CATTCTGCAA
CTGCTGGAGA TTCCCGACGA GAAGGCCCAG AACGCGCTCA AGGGCGTGAT CATGGAACTC
GAAGACTGCG CCTTCCCCCT GCTGGCCGGC ATCGAAGCCC ACTCCGACCC CCTGCAAGCC
TTCAAGGACA CCGACTACGC CCTGCTGGTC GGCGCGCGTC CCCGCGGCCC CGGCATGGAA
CGTGCCGACC TGCTGGCTGC CAACGCACAG ATCTTCACGG CCCAGGGCAA GGCGCTGAAC
GCCGTGGCCT CGCGCAACGT GAAGGTGCTG GTCGTCGGCA ACCCCGCCAA CACCAACGCC
TACATCGCCA TGAAGTCGGC TCCGGACCTG CCGGCCAAGA ACTTCACCGC CATGCTGCGC
CTGGACCACA ACCGCGCTGC ATCGCAGCTG GCTGCCAAGG CCGGCTTCAA GGTGGGCGAC
ATCCGCAAGC TGACCGTCTG GGGCAACCAC TCGCCCACGA TGTACGCCGA CTACCGCTTC
GCCACCGTCA ACGGTGAAAG CGTCAAGGCC AAGATCAACG ACCAGGCCTG GAACAAGGAC
GTGTTCCTGC CCACCGTCGG CAAGCGTGGC GCCGCCATCA TTGCCGCCCG CGGCCTGTCC
TCGGCTGCCT CGGCTGCCAA CGCGGCCATC GACCACATGC GCGACTGGGC CCTGGGCTCG
GGCGGCGAAT GGGTCACCAT GGGCGTGCCC TCCAACGGCG AATACGGCAT CCCCGCCGGC
ATCGTCTTCG GCTTCCCGGT CACCACCGAG AACGGCGAGT ACAAGATCGT CGAAGGCCTG
GAAATCGACG CCTTCTCGCA AGAGTGCATC GACAAGACCC TGGCCGAGCT GCAAGGCGAA
CAGGACGGCG TCAAGCACCT GCTGTAA
 
Protein sequence
MSKKPVRVAV TGAAGQIGYA LLFRIASGEM LGKDQPVILQ LLEIPDEKAQ NALKGVIMEL 
EDCAFPLLAG IEAHSDPLQA FKDTDYALLV GARPRGPGME RADLLAANAQ IFTAQGKALN
AVASRNVKVL VVGNPANTNA YIAMKSAPDL PAKNFTAMLR LDHNRAASQL AAKAGFKVGD
IRKLTVWGNH SPTMYADYRF ATVNGESVKA KINDQAWNKD VFLPTVGKRG AAIIAARGLS
SAASAANAAI DHMRDWALGS GGEWVTMGVP SNGEYGIPAG IVFGFPVTTE NGEYKIVEGL
EIDAFSQECI DKTLAELQGE QDGVKHLL