Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2425 |
Symbol | |
ID | 5747988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2679951 |
End bp | 2681756 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641297507 |
Product | succinate dehydrogenase, flavoprotein subunit |
Protein accession | YP_001563448 |
Protein GI | 160897866 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACT CCAAAGCAAA CATCACCAAG CGCAAGTTTG ACGTCGTCAT CGTCGGCGCT GGCGGCTCCG GCCTGCGTGC CGCGCTGGAA CTGTCGCGCG CCGGCCTGTC CGTGGCCTCG CTGTCCAAGG TCTTCCCCAC GCGCTCGCAC ACCGTGGCTG CGCAGGGCGG CGTGTCCGCT TCGCTGGGCA ACATGAGCGA GGACAACTGG CACTACCACT TCTACGACAC CATCAAGGGC TCCGACTGGC TCGGCGACCA GGATGCGATC GAGTTCATGT GCCGCGAAGC GCCCAACGTC GTGATCGAGC TGGAACACTT CGGCATGCCG TTCGACCGCA ACCCCGACGG CACCATCTAC CAGCGTCCCT TCGGCGGCCA CACGGCCAAC TACGGTGAAA AGCCCGTGCA GCGCGCCTGC GCCGCGGCCG ACCGTACCGG CCACGCCATG CTGCACACGC TGTACCAGCA GAACGTCAAG TCCAAGACCA ACTTCTTCGT GGAGTGGATG GCGCTGGACC TGATCCGCAA CACCCAGGGC GACGTGGTCG GCGTGACCGC CATCGAACTG GAAACCGGCG ACCTGTACGA GCTGCACGCC AAGGCCGTGC TGCTGGCCAC GGGTGGCGCT GGCCGCATCT TCCAGGCATC GACCAATGCC TTCATCAACA CCGGCGACGG CCTGGGCATG GCTGCACGCG CAGGCATCCC GCTGCAGGAC ATGGAGTTCT GGCAGTTCCA CCCCACCGGC GTGGCCGGCG CGGGCGTGCT GCTGACCGAA GGCTGCCGTG GCGAAGGCGC CATCCTGCTC AACAGCGAAG GCGAACGCTT CATGGAGCGC TACGCTCCCA CGCTGAAGGA TCTGGCACCG CGCGACTTCG TGTCCCGCTC CATGGACCAG GAAATCAAGG AAGGCCGTGG CTGTGGTCCC AACAAGGACT ACATCCTGAT GAAGCTGGAC CACCTGGGTG CAGACACCAT CCGCAAGCGC CTGCCTTCGG TGGAAGAGAT CGGCCACAAC TTCGCCAACG TGGACATCAC CAAGGAACCG ATTCCCGTGG TGCCCACCAT CCACTACCAG ATGGGCGGCA TTCCCACCAA CATCAACGGC CAGGTCGTGG TGTGGGACGG CCAGCAGAAC AACGTGGTCA ATGGCCTCTA TGCCGTGGGC GAATGCTCCT GCGTGTCGGT GCACGGCGCC AACCGCCTGG GCACGAACTC GCTGCTGGAC CTGCTGGTCT TCGGCAAGTC GGCCGGCAAG CACATCGTGC AGTTCGTCAA CGGCTTCGGC GACCACAAGG CCGTGCCGGC CGATGGCTCC GAGCGCACGC TCACGCGCCT GAACCAGCTC GACGACTCCA AGGAAGGCAC CTACGCCCAG GACCTGGCTG GCGACATCCG CGCCACCATG CAGCAGCATG CCGGCGTGTT CCGCACGCAA AAGAGCATGG ACGAAGGCGA AGTCAAGATC AACGCCATCC GCGAACGCGT GGGCTCCGTG ACCCTCAAGG ACAAGTCCAA GGTCTGGAAC ACCGCCCGCA TGGAAGCGCT GGAAGTGGAC AACCTGATCG AAGTGGCCCA GGCCACCATG ATCTCGGCCG CTGCCCGCCA CGAATGCCGC GGCGCCCACA CCGTGTACGA CTACGAGCAT CCTGCCGACC ACGCCGAGTT CCCGCTGGGC CGCAATGACA AGGAATGGCT CAAGCACACC CTGTGGTACA GCGCCACCAA CAGCCTGGAC TACAAGCCCG TGAACCTGAA GCCCCTCACG GTGGACAGCG TGCCGCCCAA GGTCCGCACG TTCTAA
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Protein sequence | MSYSKANITK RKFDVVIVGA GGSGLRAALE LSRAGLSVAS LSKVFPTRSH TVAAQGGVSA SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EFMCREAPNV VIELEHFGMP FDRNPDGTIY QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQQNVK SKTNFFVEWM ALDLIRNTQG DVVGVTAIEL ETGDLYELHA KAVLLATGGA GRIFQASTNA FINTGDGLGM AARAGIPLQD MEFWQFHPTG VAGAGVLLTE GCRGEGAILL NSEGERFMER YAPTLKDLAP RDFVSRSMDQ EIKEGRGCGP NKDYILMKLD HLGADTIRKR LPSVEEIGHN FANVDITKEP IPVVPTIHYQ MGGIPTNING QVVVWDGQQN NVVNGLYAVG ECSCVSVHGA NRLGTNSLLD LLVFGKSAGK HIVQFVNGFG DHKAVPADGS ERTLTRLNQL DDSKEGTYAQ DLAGDIRATM QQHAGVFRTQ KSMDEGEVKI NAIRERVGSV TLKDKSKVWN TARMEALEVD NLIEVAQATM ISAAARHECR GAHTVYDYEH PADHAEFPLG RNDKEWLKHT LWYSATNSLD YKPVNLKPLT VDSVPPKVRT F
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