Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2420 |
Symbol | |
ID | 5747983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2675764 |
End bp | 2677029 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641297502 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001563443 |
Protein GI | 160897861 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.304256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCGT CAGACTTTGC GCGAGGTTTT ATGCAGGACA CCGTGCCCCC ACCACCATCG CAACAGCGGC CAGGCAAGCG CCGCCCGCTC GCCTGGATCA TTGCATTGCT CATCCTCATC GCCATCGGAG CGGCGGTCTG GGTGCATCTG CAAGGCGCGC ATTCATCGGC GCGCCGCCCG CAGGCACAGT CCGTGGGCGT GGCCACGGCC GCGCGCGGAG ACATGCCCGA AATGCTTTCC GCGCTGGGGA CGGTGACCCC CGAGTCCACG GTCACGGTGC TGCCCCAGCT CAGCGGCTAT CTCACCGAGG TCGGCTACCG CGAGGGGGAG ATGGTCAGCA AGGGCCAGTT CCTGGCACAG ATTGACGCAC GCCAGTACGA GATCACGCGC CAGCAGGCCG AAGCCCAACT GGCCAAGGAT CAGGCGGCTC TCGCGCAGGG ACAGGCCGAC CTGCAGCGCT ATGCCCAGCT CAACGAACGC AAGTCCATCG CGCCGCAGAC CTATGCAGAC CAGCAGTTCC TAGTGCAGCA GCAGCAGGCC GCCATCAAGG CCGACCAGGC CGCCATCGCC CAGGCCCGGC TCAACATCAG CCTGTGCCAC ATCACCGCGC CCGTTGCAGG ACGGGTGGGA CTGCGGCTGG TCGATCCGGG CAACTATGTG ACGGCCTCCA GCCAGCCCGG CATCGCCGTC ATCACCAGCA TCAAGCCCAC GACGGTGGAG TTCAACGTGC CGCAGGCCTC GCTGGACCGC GTGCTGCAGC GCTTCCACTC GGGGGAACCG CTGGCCGTGG TGGCCCTGAG CAGCGACAAC GGCCGGCAGG TGGCCAGCGG CACGCTGTAC GCCATCGGCA ACCAGATGGC GACCGGCACG GGCACGGTGA CGCTTCGGGC CCGGTTCGCC AACGATGACG AGGCGCTGTT TCCCAACGAG TTCGTAAACG TGCGCCTGCA TGTGGACACG CTCAAGGACG TGGTGCTCGT GCCCACGGCC GCCATCCAGA CCGGCGCACC AGGCAGCTTC GTCTTCCTGG TGAATGCCGA TCGCAACGCG GTCACGGTAC GAAAGGTGGC CACAGGCCCC GCCGATGGCA GCCACACCGT GGTCACCCAG GGCCTGGTGG CTGGCGACAC CGTGGTGGTG GATGGCGTGG ACCGGCTGAG CGACGGAGCG CGCGTGGCGC TGCAGGGCGC AGCACCTCAG GCGGCCAAGG CAGCGGACAC GGTAGGCACG CCGGCACCGG CCCCTGCCCC TGCCCCTGCC CGCTGA
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Protein sequence | MLPSDFARGF MQDTVPPPPS QQRPGKRRPL AWIIALLILI AIGAAVWVHL QGAHSSARRP QAQSVGVATA ARGDMPEMLS ALGTVTPEST VTVLPQLSGY LTEVGYREGE MVSKGQFLAQ IDARQYEITR QQAEAQLAKD QAALAQGQAD LQRYAQLNER KSIAPQTYAD QQFLVQQQQA AIKADQAAIA QARLNISLCH ITAPVAGRVG LRLVDPGNYV TASSQPGIAV ITSIKPTTVE FNVPQASLDR VLQRFHSGEP LAVVALSSDN GRQVASGTLY AIGNQMATGT GTVTLRARFA NDDEALFPNE FVNVRLHVDT LKDVVLVPTA AIQTGAPGSF VFLVNADRNA VTVRKVATGP ADGSHTVVTQ GLVAGDTVVV DGVDRLSDGA RVALQGAAPQ AAKAADTVGT PAPAPAPAPA R
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