Gene Daci_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2304 
Symbol 
ID5747867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2534597 
End bp2534992 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content58% 
IMG OID641297386 
ProductXRE family transcriptional regulator 
Protein accessionYP_001563327 
Protein GI160897745 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0985964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCA GCAGCAGCCC AAGATCAACA AAAGAGTTAA ATATAACGTG GTTTAAATTG 
CATCAAAAAC TGACGCTCTT GCCCATGCAA AAGCGTCCTG TCAAACGCGG CCGTCCAGTC
GGCGCCACTT CATTTGATGC AGACATTGCC CGGGCTTTCG GCGCGGCGGT GCGCTCCCTT
CGCAACGAGC GCGGCATCTC CCAGGAGTCA TTGGCCAACC TCGCCGATAT CGAGCGTTCT
CACATGGGCA AGGTGGAGCG CGGGGAGCAC ATGCCCACGC TGGTCATCGT GTTCAAGATT
GCGCGGGGGT TGGGGTGTGG TACGGCGGAG GTGATGGGGA GGGCTGACGA GGTGTTGAGT
GCAGGTACCA CGCAAGCGAA ACCAGCAGTT CAGTGA
 
Protein sequence
MQGSSSPRST KELNITWFKL HQKLTLLPMQ KRPVKRGRPV GATSFDADIA RAFGAAVRSL 
RNERGISQES LANLADIERS HMGKVERGEH MPTLVIVFKI ARGLGCGTAE VMGRADEVLS
AGTTQAKPAV Q