Gene Daci_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2290 
Symbol 
ID5747853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2517422 
End bp2518519 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content72% 
IMG OID641297373 
Producthypothetical protein 
Protein accessionYP_001563314 
Protein GI160897732 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000676004 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCACCG AACCGAGCCT TGACGACCTG CGCCGCCATG CCGTGGCGCG TACCCTGTTC 
ACGCCGACCA CCCTGCCTGC GGCCATACAG CGCCTGGGTT TTGTGCAGGC AGACCCGATC
CGCGCGCCGG CCCGGGCGCA GGACCTGACG CTGCGCCACC GCGTCAAGGA CTACCGCGCC
GGCGACCTGG AACGCCGCTA CGCGCGCCTG CCGATCGACG AGGACTGCCT GGTCAACTAC
GGCTTTCTGC CCAGTGAGCA CCTGGCGCTG ATGCACCCGC GCCAGGCCCG CAAGGCCTGG
GATGCCGAGA CGCAGCGCAA GGCCGCCGAG GTGCTGGCGT TTGTGCGCGA GCGCGGCGCC
GCGCATCCGC GCGAGGTGGA GCAGCATTTC TCGCACGGAA GCGTGAAGAA CTACTGGGGC
GGCTCGGGCA GCGCCAGCAC GCAGTTGCTC GACGGCATGC ACTACCGCGG CCTGCTGCGC
GTCAAGCGCC GCGACAGCGG CACGCGCGTC TACGAGGCCA TCGCCCACCC GCCGGCCGAC
GACAGCCCCG CCGCCAGCGC CCGGCGCGCC GCCGCGCTGA TCGACCTGGT GGTGCGCAAG
TACGCACCGC TGCCGGCCCC CAGCCTGACC TACCTGGTGC GCCTGCTGGG CTACGGCGCC
CCCCATCTGG CGCAACAGAC CCAGGCAGCG CTGCAGCTGG CGCGCGAGCA GCTGGCCAGT
TGCCGCATAG ACGGAACCAC CTGGTACTGG CCCGCCGACG AGAACCCACG CTCGCGCCGC
CATGCCTTCG ACGAGCGGCT GCGCCTGCTC GCGCCCTTCG ATCCCGTGGT CTGGGACCGG
CGCCGCTTCA CGCTGCTCTG GGGCTGGACC TACAAGTTCG AGGCCTATAC GCCACCGGCC
CGGCGCCAGC TCGGCTACTA CGCCCTGCCC ATGCTCTGGC AGGGCCATGT AATCGGCTGG
GCCAACCTGC AGGCGCGCGA CGGCCGGCTG GAGCCGTCAT TCGGCTATGT GGCCGGCGCG
GCGCCCGGCG ATGCCACCTT TCGCAGTGCG CTGGATGAGG AGCTGCAGCG CATGGAGCTG
TTCCTGGCGC CGCGCTGA
 
Protein sequence
MPTEPSLDDL RRHAVARTLF TPTTLPAAIQ RLGFVQADPI RAPARAQDLT LRHRVKDYRA 
GDLERRYARL PIDEDCLVNY GFLPSEHLAL MHPRQARKAW DAETQRKAAE VLAFVRERGA
AHPREVEQHF SHGSVKNYWG GSGSASTQLL DGMHYRGLLR VKRRDSGTRV YEAIAHPPAD
DSPAASARRA AALIDLVVRK YAPLPAPSLT YLVRLLGYGA PHLAQQTQAA LQLAREQLAS
CRIDGTTWYW PADENPRSRR HAFDERLRLL APFDPVVWDR RRFTLLWGWT YKFEAYTPPA
RRQLGYYALP MLWQGHVIGW ANLQARDGRL EPSFGYVAGA APGDATFRSA LDEELQRMEL
FLAPR