| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2274 |
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| Symbol | |
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| ID | 5747837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2501686 |
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| End bp | 2504421 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297358 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001563299 |
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| Protein GI | 160897717 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.103313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCCTTC CTGCGGCCCC GCGCCATCCA GGCAGGCCTT GCCCGGCGCC TTCGCGCCGC
CGCAACCTGT TGATTCCCAA GCCAATGAGC GACCTCTCGC AAAGCACACA GCCCTCTCCG
GCCCCTGATC TGTCGGCGCA CACGCCCATG ATGCAGCAGT ACCTGGGCAT CAAGATCAAC
TACCCCGACA CGCTGGTTTT CTACCGCATG GGGGATTTCT ACGAGCTGTT CTTCGGGGAT
GCGGAGAAGG TGGCGCGGCT GCTGGACATT ACGCTGACCA CGCGCGGGCA GACGGCGGGG
CAGCCGATTC CGATGGCGGG CGTGCCCTTC CATGCGCTGG AGAACTACCT GGGCCGGCTG
ATCAAGCTGG GCGAGTCGGT GGCGATCTGC GAGCAGGTGG GCGAGGTGGG CGCCGCCAAG
GGCCCGGTGG AGCGCAAGGT GGTGCGCGTG GTGACGCCGG GGACGCTGAC CGACAGTGAG
CTGCTGTCGG ACAAGAGCGA GGCGATCTTG CTGTCCCTGC ACACGGCCGG GCGCCAGCGC
TGCGGCCTGG CCTGGATGGC GGTGACGCAG GGGCGCATTC ATCTGGCCGA ATGCTCCCAC
GACGAGCTGG GCGCCTGGAT TTCACGCATT GCGCCCAGCG AGCTGATCTA CAGCGCGGGC
GTGACCGAGC GTTTCGAGCA GAGCCTGTTC GCGCTGCGCC ATGGCGGCTC CATCGCCTGC
CCGCTATCGC CGCGGCCCGA CTGGCAGTTC GACGGCGGCC TGGGCGAGCG CAAGCTGCTG
GAGCTGCTGG GCGCCGCCAG CCTCAAGGCC TGGGAGGCCG AGGACCTGTC GCTGGCCCAT
GGCGCCAGCG CCGCGCTGCT GTCGTATGCC GAGCACACGC AGGGCCGCAG CCTGTCGCAC
ATCCACGCTC TGCAGGTGCA GCGCGACGAT GAGCTGATTG CGCTGCCGCT GGCCACGCGC
CGCAACCTGG AGCTGGTCAA GACGCTGCGC GGCGAGGATT CGCCCACATT GTTCTCCCTG
CTGGACACCT GCATGACGGG CATGGGCAGC CGCCTGCTCA AGGCCTGGCT GCTGGAGCCG
CGCCGCGACC GCACGCAGGC CATGGCGCGG CTGGAGGCCA CGCGGGCGCT GCAGGGCGCC
AGCGCAGGCG GCATGGCCGC GCCCTGGCAG CAGTTGCGCG AGCAGCTCAA GGGCGTGAGC
GATGTGGAGC GCATCACCGC GCGCACCGCG CTGCGCCAGG TGCGCCCGCG CGAGCTGGTG
GGACTGGGCC GCACGCTGCA CAAGGCGGCC GTGCTGGCCC AGGCCGGGCA GACACCCTCG
GCCCACCTGA CCCAGCTGTT TGCCGACCTG CAGCCACCCG AAGGCTGCGC CGAGCTGCTG
GTGCGCGCCA TCATGGAAGA GCCGGCCGCC CTGGTGCGCG ACGGCGGCGT GTTTGCCACG
GGCTACGACG CCGAGCTGGA CGAGCTGCGC GCCATCCAGA ACAACTGCGA CGACTTCCTG
CTGGAGCTGG AGGCCAAGGA AAAGCTGCTG ACCGGCATTC CCAACCTGCG CGTGCAGTTC
AACAAGGTGC ACGGCTTCTA TATAGAGATC ACCAACAGCT ACAAGGACGC GGTGCCCGAG
CGCTACCGCC GCCGCCAGAC GCTGAAGAAC GCCGAGCGCT ACATCACGCC CGAGCTCAAG
GCCTTCGAGG ACAAGGCCCT GTCGGCGCAG GAGCGGGCGC TGCAGCGCGA GAAATTCCTC
TACGAGCAGC TGCTGGACCA GCTGCAGCCC CATGTGCCGG CGCTCACGCG CGTGGCCGGC
GCCATTGCCG CCATCGACGT GCTGTGCACG CTGGCCGAGC GCTCGCTGAC GCTGAACTGG
TGCGCGCCCG AGTTCGTGAA CCATCCCTGC ATCGAGATCG AGGCCGGCCG CCACCCGGTG
GTGGAAGCGC GCATGGCCGA GACCTCCAGC GGCAGCTTCA TCGCCAACCA CACGCGCATG
AACGCCAACA CGCGCATGCA GATCATCACC GGCCCCAACA TGGGCGGCAA GTCGACCTAT
ATGCGCCAAG TGGCGCTGAT CGTGCTGCTG GCCAGCATGG GCTCGCATGT GCCGGCGTCC
AGCTGCCGGC TGGGGCCCAT CGATGCCATC CACACGCGCA TCGGCGCGGC CGACGACCTG
GCCAATGCCC AGTCCACCTT CATGATGGAG ATGACCGAGG CCGCGCAGAT CCTGCATTCG
GCCACGCCCC ACAGCCTGGT GCTGATGGAC GAGATCGGCC GGGGCACCAG CACCTTCGAC
GGCCTGGCGC TGGCCAGCGG CATCGCCACC CAGCTGCACG ACAGGACGCG CGCCTTCACG
CTGTTTGCCA CGCACTACTT CGAGCTGACC GAGCTGCCGG CCAAGGCACG CGCAGCCGTG
AACATGCATG TGAGCGCGGC GGAGTCCGGC CAGGACATCG TCTTCCTGCA CGAGATCCAG
CCCGGCCCGG CCAGCCGCAG CTACGGTATC CAGGTGGCCA AGCTGGCGGG CATGCCGGCC
GGCGTGCTGC ACCACGCGCG CCATGCGCTG GAGGCACTGG AGGCCCATGC CGACGAGGGC
CGCCTGCAGG TGGACCTGTT CGATGCGCCC GACATGCCCG AGCCCGAAAG CCGCCACGAC
CCGCTGGCCC AGGCGCTGGC CGCCATCAAT CCCGACGCAC TGAGCCCGCG CGAGGCGCTG
GAAGCCCTTT ACCAGCTCAA GAAGATCGCC GCCTGA
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| Protein sequence | MRLPAAPRHP GRPCPAPSRR RNLLIPKPMS DLSQSTQPSP APDLSAHTPM MQQYLGIKIN
YPDTLVFYRM GDFYELFFGD AEKVARLLDI TLTTRGQTAG QPIPMAGVPF HALENYLGRL
IKLGESVAIC EQVGEVGAAK GPVERKVVRV VTPGTLTDSE LLSDKSEAIL LSLHTAGRQR
CGLAWMAVTQ GRIHLAECSH DELGAWISRI APSELIYSAG VTERFEQSLF ALRHGGSIAC
PLSPRPDWQF DGGLGERKLL ELLGAASLKA WEAEDLSLAH GASAALLSYA EHTQGRSLSH
IHALQVQRDD ELIALPLATR RNLELVKTLR GEDSPTLFSL LDTCMTGMGS RLLKAWLLEP
RRDRTQAMAR LEATRALQGA SAGGMAAPWQ QLREQLKGVS DVERITARTA LRQVRPRELV
GLGRTLHKAA VLAQAGQTPS AHLTQLFADL QPPEGCAELL VRAIMEEPAA LVRDGGVFAT
GYDAELDELR AIQNNCDDFL LELEAKEKLL TGIPNLRVQF NKVHGFYIEI TNSYKDAVPE
RYRRRQTLKN AERYITPELK AFEDKALSAQ ERALQREKFL YEQLLDQLQP HVPALTRVAG
AIAAIDVLCT LAERSLTLNW CAPEFVNHPC IEIEAGRHPV VEARMAETSS GSFIANHTRM
NANTRMQIIT GPNMGGKSTY MRQVALIVLL ASMGSHVPAS SCRLGPIDAI HTRIGAADDL
ANAQSTFMME MTEAAQILHS ATPHSLVLMD EIGRGTSTFD GLALASGIAT QLHDRTRAFT
LFATHYFELT ELPAKARAAV NMHVSAAESG QDIVFLHEIQ PGPASRSYGI QVAKLAGMPA
GVLHHARHAL EALEAHADEG RLQVDLFDAP DMPEPESRHD PLAQALAAIN PDALSPREAL
EALYQLKKIA A
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