Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2228 |
Symbol | |
ID | 5747791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2443339 |
End bp | 2443932 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641297312 |
Product | cytochrome B561 |
Protein accession | YP_001563253 |
Protein GI | 160897671 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000575966 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00851734 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGAGT CCTCAGCCCG CGCCAACGCG CCAGCAAAAT CGTCCTCCAG AGCCACGCGC TATACCGGCG TGGCCATGGC CGCCCACTGG GTGCTGGCAC TGGGCCTGAT CGCCGCCCTG GGCCTGGGCT GGTACATGAC CGGCCTGCCG TTCTCCCCTT CGCGCCTGAA GCTGTACAAC TGGCACAAGT GGCTGGGCGT CACGCTTTTG TCGCTGAGCC TGCTGCGCCT GCTCTGGCGC GTCACCCACC GCCCGCCCGA GCTGCCGCCC GCCGTGGCCC GCGCCATGCC GCAATGGCAG CACTGGACCC ACAACGGCAC CCACCACGCC ATGTACCTGC TGTTCTTCGC CGTGCCCCTG CTGGGCTGGG CCTACAGCTC GGCGGCCGGC TTTCCCATCG TCTTCCTCGG CATCCTGCCC CTGCCTGACT TCGTGAGCGC CAGCCCCGAA CTGGCGCAAA CCCTCAAGCC CCTGCACGGC TGGGCGGCCT GGGCCCTGGT CGTGCTGATC GCCATGCATG TGGGCGCCGC CCTCAAGCAC CAGTTCATCG ACCGCGACGG CCTGATCTCC CGCATGCTGC CGGGCCGCGC CTGA
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Protein sequence | MTESSARANA PAKSSSRATR YTGVAMAAHW VLALGLIAAL GLGWYMTGLP FSPSRLKLYN WHKWLGVTLL SLSLLRLLWR VTHRPPELPP AVARAMPQWQ HWTHNGTHHA MYLLFFAVPL LGWAYSSAAG FPIVFLGILP LPDFVSASPE LAQTLKPLHG WAAWALVVLI AMHVGAALKH QFIDRDGLIS RMLPGRA
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