Gene Daci_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2228 
Symbol 
ID5747791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2443339 
End bp2443932 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content69% 
IMG OID641297312 
Productcytochrome B561 
Protein accessionYP_001563253 
Protein GI160897671 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000575966 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00851734 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAGT CCTCAGCCCG CGCCAACGCG CCAGCAAAAT CGTCCTCCAG AGCCACGCGC 
TATACCGGCG TGGCCATGGC CGCCCACTGG GTGCTGGCAC TGGGCCTGAT CGCCGCCCTG
GGCCTGGGCT GGTACATGAC CGGCCTGCCG TTCTCCCCTT CGCGCCTGAA GCTGTACAAC
TGGCACAAGT GGCTGGGCGT CACGCTTTTG TCGCTGAGCC TGCTGCGCCT GCTCTGGCGC
GTCACCCACC GCCCGCCCGA GCTGCCGCCC GCCGTGGCCC GCGCCATGCC GCAATGGCAG
CACTGGACCC ACAACGGCAC CCACCACGCC ATGTACCTGC TGTTCTTCGC CGTGCCCCTG
CTGGGCTGGG CCTACAGCTC GGCGGCCGGC TTTCCCATCG TCTTCCTCGG CATCCTGCCC
CTGCCTGACT TCGTGAGCGC CAGCCCCGAA CTGGCGCAAA CCCTCAAGCC CCTGCACGGC
TGGGCGGCCT GGGCCCTGGT CGTGCTGATC GCCATGCATG TGGGCGCCGC CCTCAAGCAC
CAGTTCATCG ACCGCGACGG CCTGATCTCC CGCATGCTGC CGGGCCGCGC CTGA
 
Protein sequence
MTESSARANA PAKSSSRATR YTGVAMAAHW VLALGLIAAL GLGWYMTGLP FSPSRLKLYN 
WHKWLGVTLL SLSLLRLLWR VTHRPPELPP AVARAMPQWQ HWTHNGTHHA MYLLFFAVPL
LGWAYSSAAG FPIVFLGILP LPDFVSASPE LAQTLKPLHG WAAWALVVLI AMHVGAALKH
QFIDRDGLIS RMLPGRA