Gene Daci_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2185 
Symbol 
ID5747747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2398319 
End bp2399371 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID641297268 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_001563210 
Protein GI160897628 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.654153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTT CTGCCCCCTC CTCTACCCCG ATTTCCTACA AAGACGCCGG CGTCGACATC 
GTCGCTGGCG ATGCGCTGGT CGAGCGCATC AAGCCGCTGG CCAAGAAGAC CATGCGCGAA
GGCGTGATGG CCGGCATCGG AGGCTTCGGC GCGCTGTTCG AGGTGCCCAA GCGCTACAAG
GAACCCGTGC TGGTCTCGGG CACCGATGGC GTGGGCACCA AGCTCAAGCT GGCCTTCGAG
TGGAACATGC ACGACACCGT GGGCATCGAC CTGGTGGCCA TGAGCGTCAA CGACGTGCTG
GTCCAGGGCG CCGAGCCCCT GTTCTTCCTC GACTATTTCG CCTGCGGCAA GCTGGACGTG
GACACGGCCG CTGCCGTGGT CGGCGGCATT GCACGCGGCT GCGAGCTGTC GGGCTGCGCA
CTGATCGGCG GCGAAACCGC CGAAATGCCC GGCATGTACC CGGCCGGTGA ATACGACCTG
GCGGGCTTTG CCGTCGGCGC CGTCGAAAAA TCCAAGATCC TCACGGGCCA GAGCGTGGCC
GCAGGCGACG TGGTGCTGGG TCTGGCCTCG GCCGGCGTGC ACTCCAATGG CTTTTCCCTG
GTGCGCAAGT GCATCGAGCG CGCCGAAGCC CAGGGCAGCC TGCCCGAATC GCTGGACGGC
AAGCCGTTCA AGCAGGCCAT CATGGAACCC ACGCGCCTGT ACGTGAAGAA CGTGCTGGCC
GCACTGGAGC AGCACCCCAT CAAGGCGCTG GCCCACATCA CCGGCGGCGG CCTGCTGGAG
AACATCCCCC GCGTGCTGCC CGAAGGCCTG GCCGCCCACC TGGATGCCGG CAGCTGGCCC
CAGACCGAGC TGTTCGCCTG GCTGCAGAAG ACGGCCGGCA TCGACGCCGT GGAAATGAAC
CGCACCTTCA ACAACGGCAT CGGCATGGTC GTTGTTGTGC CTGCAGAGGC TGCCGAAGCC
ACGGCCGCCA CGCTCAAGCA GCTGGGCGAG ACGGTCTACA CCATCGGACG CATCGCCGCA
CGCGGCGAGG GCGAGCCTGT CGAGGTCCGC TGA
 
Protein sequence
MSSSAPSSTP ISYKDAGVDI VAGDALVERI KPLAKKTMRE GVMAGIGGFG ALFEVPKRYK 
EPVLVSGTDG VGTKLKLAFE WNMHDTVGID LVAMSVNDVL VQGAEPLFFL DYFACGKLDV
DTAAAVVGGI ARGCELSGCA LIGGETAEMP GMYPAGEYDL AGFAVGAVEK SKILTGQSVA
AGDVVLGLAS AGVHSNGFSL VRKCIERAEA QGSLPESLDG KPFKQAIMEP TRLYVKNVLA
ALEQHPIKAL AHITGGGLLE NIPRVLPEGL AAHLDAGSWP QTELFAWLQK TAGIDAVEMN
RTFNNGIGMV VVVPAEAAEA TAATLKQLGE TVYTIGRIAA RGEGEPVEVR