Gene Daci_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2171 
Symbol 
ID5747733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2384764 
End bp2385969 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content69% 
IMG OID641297254 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001563196 
Protein GI160897614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.611147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.836675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCC ACGTCCCGCC CTACCCCGGA GATCCCATCC TGTCGCTGAT GGAAGCCTTT 
CAGCAGGACC CGCGCGCCGA CAAGGTCAGC CTGAGCATCG GCCTGTATTT CGACGAGGCC
GGCCGCCTGC CCGTGCTGGA CTCCGTGCGA CAGGCTGGCG ATGCCCTGGC CCGCGAGCAA
AGCCCCAGCG GCTACCTGCC CATCGAAGGC ATTGCTCCCT ACCGCCAACT GGTGCAGAAC
CTGGTGTTCG GCGCGCAGCA CGAGGCCGTG CGCGCGCAGC GCATCGCCAC CGTGCAGACC
CTGGGCGGCT CGGGTGCGCT CAAGCTGGGC GCGGACTTCA TCAAGCACTA TTTCCCCGAC
GCCGAGGTCT GGCTCAGCGA TCCCACCTGG GACAACCACC TGGCCATCTT CCAGGGCGCG
GGCCTGCGCA CCCACAGCTA CCCCTACTAC GACGCGGCCA CGGGCAGCCT GCGCTTCGAC
GCCATGCTGC AGACGCTGCG CGGCCTGCCC TCGGGCAGCG TGGTGCTGCT GCATGCCAGC
TGCCACAACC CCACGGGCGT GGACCTGTCG CGCGAGCAGT GGCAGCAACT GATCCCCGTG
ATCGTGGAGC GCGGCCTGAT CCCCTTCGTG GACATGGCCT ACCAGGGCTT TGGCGATGGG
CTCGATGAAG ACGCCTGGTC CGTGCGCGCG CTGGCCGATG CGGGCGCCCA GGCCTTTGTG
GCCAATTCGT TTTCCAAGAA CTTCTCGCTG TATGGCGAAC GCGTGGGCGG CCTCAGCGTG
GTCTGCAGCG ACGCGGCCAC GGCCGGCAAT GTGCTGGGCC AGCTCAAGGC CACGGTGCGC
AGCAACTATT CCTCGCCCCC CACCCGTGGC GCGCGCCTGG TGCAGCAGGT GCTGGCGTCG
CCCGAACTGA GCGCCCAATG GGCGCAGGAG CTGGCGCAGA TGCGCGGCCG CATCAAGGAC
ATGCGCGCCC AGCTGCACGG CGCGCTGCAT GAACGCTTTG GCGAGCGGCG CGACTTCGGC
TTCCTGCTGA CCCAGCGCGG CATGTTCAGC TACACCGGCA TCAGCGAGCC CCAGGTCCAC
CGCCTGCGCG ACGAGCACGG CGTGTACCTG ATCCGCTCGG GCCGCATGTG CATGTCGGGC
CTGTCGGGCG CCAACGTGCA GTACGTGGCC GACGCCATTG CCACGGTGCT GGAGGCACCG
CAATGA
 
Protein sequence
MFSHVPPYPG DPILSLMEAF QQDPRADKVS LSIGLYFDEA GRLPVLDSVR QAGDALAREQ 
SPSGYLPIEG IAPYRQLVQN LVFGAQHEAV RAQRIATVQT LGGSGALKLG ADFIKHYFPD
AEVWLSDPTW DNHLAIFQGA GLRTHSYPYY DAATGSLRFD AMLQTLRGLP SGSVVLLHAS
CHNPTGVDLS REQWQQLIPV IVERGLIPFV DMAYQGFGDG LDEDAWSVRA LADAGAQAFV
ANSFSKNFSL YGERVGGLSV VCSDAATAGN VLGQLKATVR SNYSSPPTRG ARLVQQVLAS
PELSAQWAQE LAQMRGRIKD MRAQLHGALH ERFGERRDFG FLLTQRGMFS YTGISEPQVH
RLRDEHGVYL IRSGRMCMSG LSGANVQYVA DAIATVLEAP Q