Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2160 |
Symbol | |
ID | 5747722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2373948 |
End bp | 2375249 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641297243 |
Product | major facilitator transporter |
Protein accession | YP_001563185 |
Protein GI | 160897603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.190844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.652722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCAG CGCCACAACA GCCCCCACAC AACAACATAC ACACAGAGGC TTCGCAGACC TCCCCCGCAG CACCGCCGCC GCGCAGCCAG CTGCTGTGGG CCATGCTGCT GTCCCTGCTC TCGGCCTTTG CGCTGAGCCA GGCCTTTCGC ACCATCACCT CGGTCATGGC CACGGGCCTG CAGCAGGATT TCGGGCTCAC GGCCCAGTCG CTGGGCGCCT TCGCCGGCCT GTTCGGCCTG TCCTTCGGCG TGGCCCAGCT GCTGATGGGC ATCGGCATGG ACCTCTACGG CCTGCGGCGC ACGGTGCTGC TGTCGTTTCC GCTGGCGATT GCGGGGTCGG CACTGTCCGC CGCCGCACCC AACTACGGCT GGCTGATGGT GGGCCAGTTG CTGATCGGCG TGGGCTGCTC GCCCGCCTTT CTGGCCTGCA CCATGTTCAT CTCGCGCCAC TTTCCCATGG ACCGCTTTGC CTTTCTGTCG GGCGTGGGCA TGGGTGTCGG TGGACTGGGG CTGCTGTTCA CAGGCACGCC ACTGGCCTGG CTGGTCCAGC ATTTCGGCTG GCGCTCGGGC TTTGCGCTGC TGGCCGTGAT GTCGGCCCTG TCGTGGCTGC TGATCTGGTG GCGCGTGCAC GAGCCTGCCC GCAGCGGAGC ACAGACCGCC GCACGGGAAA GCTGGGGCGT GGCGGCACGC CGCATGGCCG AGCTGTTCAC GCTGCCGCAC ACGCTGGGCA TCGTCCTGCT GGCCATGGCC TGCTATGCAT CGTTTCTGGC GCTGCGCGGC CTGTGGCTGG GGCCGCTGCT CATCCATCGC TATGGCTTTT CGCTGGTGGA AAGCGGCAAT GTGGCGCTGG TCGTATCGAT GATCTCGCTG TTCAGCCCCG CGATTTTCGG GCGCATGGAC CCCGGCCCAG GACGGCGCCG GCGCTGGCTC ACCAATTACT CGCTGCTCAT GGGCAGCCTG TTCATGCTTA TGGCCTTTTT GCACCATGGC TGGACCAATG TGGCGCTGAT CTTCGCCATG GGCCTGCTGT CGGGCTATTC GGTGCTGCAG TACGCCGATG TGCGCGCTTC CTACCCCCCA GAGATGACCG GCCGCGCGCT GTCGCTGTTC ACCATGGCCA TGTTCCTGGG CGTGGCCCTG GTGCAATGGT TCACGGGCTG GGTGGCGGCC TGGGCCGAGG CCTGGGGCGT GGAGCCCTAC AAGGCCGTGA TGATCTCGAT TGCAGCCACG CTGGTGGGCG CGTCAACCGC GTTCCGTTTC CTGCCCTCCT CGCCGCTGCT GCGCCAGGCC TCCGCCGCCT AG
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Protein sequence | MSAAPQQPPH NNIHTEASQT SPAAPPPRSQ LLWAMLLSLL SAFALSQAFR TITSVMATGL QQDFGLTAQS LGAFAGLFGL SFGVAQLLMG IGMDLYGLRR TVLLSFPLAI AGSALSAAAP NYGWLMVGQL LIGVGCSPAF LACTMFISRH FPMDRFAFLS GVGMGVGGLG LLFTGTPLAW LVQHFGWRSG FALLAVMSAL SWLLIWWRVH EPARSGAQTA ARESWGVAAR RMAELFTLPH TLGIVLLAMA CYASFLALRG LWLGPLLIHR YGFSLVESGN VALVVSMISL FSPAIFGRMD PGPGRRRRWL TNYSLLMGSL FMLMAFLHHG WTNVALIFAM GLLSGYSVLQ YADVRASYPP EMTGRALSLF TMAMFLGVAL VQWFTGWVAA WAEAWGVEPY KAVMISIAAT LVGASTAFRF LPSSPLLRQA SAA
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