Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2146 |
Symbol | |
ID | 5747708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2357807 |
End bp | 2358913 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641297229 |
Product | basic membrane lipoprotein |
Protein accession | YP_001563171 |
Protein GI | 160897589 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.233394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAAA ACCTCGCAGC CGCAGTCGCG GCCGCAAGTC TTGTATCCAC GGCCTTGTCC CAAGGCCATC CCGCCCCTTC ATCCCCCGCA GGTTCCGCGC CCCTCAAGGC CGCCTTCGTC TATCTGACGC CCGTGCTCGA CGCCGGCTGG ACGCGCCAGC ACGACGAGGG CCGGCGCGCA TTGCAGGCGG CGCTGGGCCC GCGCGTGCAG ACGCGTGCGG TGGACAGCGT GCCCGAGGGC CCCGACGCCG AGCGCGTGCT GCGCGACCTG GCCGCCTCCG GCAACCAGCT GATCTTCACC ACCAGCTTCG GCTACACCGA GTCCGTGATG CGCGTGGCGC GCGACTTCCC GCAGGTGAAG TTCGAGTCGG TCACGGGCTT CAAGCGCGCC GACAACGTGG CCACCTCGAA CGCTCGCTAC TACGAGGGCC GCTATCTGTC AGGCATTGCC GCCGGCCGTG CCAGCAAGAC GGGCGTGGCC GGCTTCGTGG TCGGCTTTCC GATTCCCGAG GTGCTGCAGG GCATCAACGC CTTCACGCTG GGCATGCGTT CGGTCAATCC CAAGGCCACG GTCAAGGTGG TCTGGCTGGA TACCTGGTTC GACCCGCCGC GCGAGCGCGA TGCGGCCATG GCGCTGTTCA ACGGCGGCGT GGACGTGGTG TCCTTCCAGG TCGCATCCAC GGCCGTGATG CAGGCCGCCC AGGAGCGCGG CCGCATGGCG ATTGCCTACC ACTCCGACAT GCGCAAGGAC GGGCCCGACG CCCAGTTGCT GGCCGTCACC CACCAGTGGG GCGACTACTA CACGGCGCGC GCCCGCGCCG TGCTGGACGG CAGCTGGAAG AGCCAGGACA CCTGGGGCGG CGTGCGCGAG GGCATGATCC GCGTGGAAGG CTTCGGTCCC AAGCTGCCGC CCGCCGTGCG CGAGGAAGTG CTGCAGCGCC AAAAGGACAT GGCCCAGGGC CGCCTGCAGC CCTTCAAGGC CGGCGACCAG CCGGTGCGCG ACAACCAGGG CCAGGTGCGC ATTCCAGCCG GCAAGCAGCT GGATGATGCG CAGATCCTGC AGATGAACTG GCTGGTGGAA GGCGTGCAGG CCACCCTGCC CAAGTGA
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Protein sequence | MYKNLAAAVA AASLVSTALS QGHPAPSSPA GSAPLKAAFV YLTPVLDAGW TRQHDEGRRA LQAALGPRVQ TRAVDSVPEG PDAERVLRDL AASGNQLIFT TSFGYTESVM RVARDFPQVK FESVTGFKRA DNVATSNARY YEGRYLSGIA AGRASKTGVA GFVVGFPIPE VLQGINAFTL GMRSVNPKAT VKVVWLDTWF DPPRERDAAM ALFNGGVDVV SFQVASTAVM QAAQERGRMA IAYHSDMRKD GPDAQLLAVT HQWGDYYTAR ARAVLDGSWK SQDTWGGVRE GMIRVEGFGP KLPPAVREEV LQRQKDMAQG RLQPFKAGDQ PVRDNQGQVR IPAGKQLDDA QILQMNWLVE GVQATLPK
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