Gene Daci_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2139 
Symbol 
ID5747701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2349586 
End bp2351016 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content71% 
IMG OID641297222 
Producthistidine kinase 
Protein accessionYP_001563164 
Protein GI160897582 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.055432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCG CAGCCTGCCT GCGCCGCGCC TGGCGCGCCG GGGCCGAACC CAGCCTGATC 
CGGCGCCTGG TGCTTGCCCA GGCCGTGGTG CTGGTCGTGG TGTGGATCGC CCTCGGCGCG
CTGCTGATGG TGGAGTTCCA GAGCGATGCC TCGGAGCTGG ACCCGTTGCG CCACGACGCG
GTATTGGCGG TTGCCGGCCC CCTGCTGGAC CGCCCTGCCG CGCTGCAGGA AGCCCTCGCC
CGCATCGACC TGGCCCGCAG AACCGAAGGG CAGTTGCCCG GCCAGCCGCG CTGGCGCGTG
AACATGATGG TGTGGCACGG ACCGCAGCTG CTGTTTGTCT CGCCCGGCCT TTCCGCCCCC
ATCGTGCAGA CCGCCACGGA TCGCATCGAG ACAGTCACGG CGGCAGGGGA ACGCTGGCGC
GCCATGACGC GCTCGGACGC CTCGGGCCAG TTGCGCGTGA CGCTGGCCAT CTCCAATGAG
CCCGGGCGCG GCATGCTCAC GCTGGCCTCC AGCAGCCTGC TGGTGCTGCC CCTGCTGATC
AGCGCGCCGC TGCTGGTTTT TCCGGCGTGG GCCGCCGTGT GGCTTGCGCT CAGGCCCTGG
CGGCGCCTCA GTGCCGAAAT CGCGCGCCGT GGCATGGGCG ACCTTGCGCC GCTGGGTTTT
CAGCCGCGCC ACCGCGAGCT CAAGCCCCTG GCCCACTCTG TCAACCGCCT GCTGCAGAGC
GTCAGGGACG GGCTGGCCAG GGAGCGCAGC TTCATCGCCG ATGCTGCCCA TGAACTGCGC
ACACCCGTGG CCGCCATCCG CGTGCATGCG GAAGCCCTGA ACAACCTGCC TTTGCCGGCA
GGGCTGGCCG ACCGCCTGGG CGCACGCCTG GATGCGCTGG TCGGCTGCAG CGCACGCGCG
TCCCGCCTGG TGGACCAGAT GCTGGCACTG ATGCGGGCCG ACGCCGGACC CTCCGCGCCC
GGCATGCAAT CGCTGGAGAT CGACAGGCTG CTGCAGCAGC GCCTGGGTTG TCTGGCGGGC
CTGGCCCGCG AGCGCGGCGT GGAGCTTGAT CTGGACGCCG AAGGTCCGCT GCCGCTGTGG
GGCGAACGCC AGGCAATGGA ATCCCTGATC GACAACCTGG TGGACAACGC CATCAAGTAC
AGCCCGCCAG GCGGCCTGGT GCGCGTGCGC GCGCGCTGGG ATGCGGCCAC GCAGGCAACG
GTGCTCGAAG TCATGGATGA GGGACCGGGC ATTGCGCCGG CCTGGCGCAG CCGTGTATTC
GACCGCTTTT TCCGCGCGCC CGACCAGGCG GTGGCGGGCA GCGGGCTGGG CCTGGCCATC
GTGGCGGCCG TGGTGCGCCA GCATGGGGGG AGCATCGTCT GCGATGACGC GGACGATGGC
CCCGGACTGT GCATGCGCGT CAGCTTCCCA GGCGGGACTG CCCCGCACTA G
 
Protein sequence
MKAAACLRRA WRAGAEPSLI RRLVLAQAVV LVVVWIALGA LLMVEFQSDA SELDPLRHDA 
VLAVAGPLLD RPAALQEALA RIDLARRTEG QLPGQPRWRV NMMVWHGPQL LFVSPGLSAP
IVQTATDRIE TVTAAGERWR AMTRSDASGQ LRVTLAISNE PGRGMLTLAS SSLLVLPLLI
SAPLLVFPAW AAVWLALRPW RRLSAEIARR GMGDLAPLGF QPRHRELKPL AHSVNRLLQS
VRDGLARERS FIADAAHELR TPVAAIRVHA EALNNLPLPA GLADRLGARL DALVGCSARA
SRLVDQMLAL MRADAGPSAP GMQSLEIDRL LQQRLGCLAG LARERGVELD LDAEGPLPLW
GERQAMESLI DNLVDNAIKY SPPGGLVRVR ARWDAATQAT VLEVMDEGPG IAPAWRSRVF
DRFFRAPDQA VAGSGLGLAI VAAVVRQHGG SIVCDDADDG PGLCMRVSFP GGTAPH