| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2114 |
|---|
| Symbol | |
|---|
| ID | 5747676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2319971 |
|---|
| End bp | 2320948 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297197 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001563139 |
|---|
| Protein GI | 160897557 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00328294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA TCACCAGGGT TGCCGCCGCG TGCGCGCTGG CCGCCGCCAT TCCTGCCACC
ATCCCAGCTG CCTGGGCCCA GGCCTGGCCG GCGCGCCCCG TCAACCTCAT CGTGCCGTTT
CCCGCAGGCG GCACCACAGA CGTGCTGGCA CGTGCGCTGG GCCAGGAGCT GTCCAAGAGT
CTGGGCCAGC CCGTGGTCGT GGAAAACCGC CCCGGCGCGG GCGCCACCCT GGGCGCCGAC
CATGTGGCCA AGGCGAAACC TGACGGCTAC ACCCTGCTCA TGGGCGCCGT GCACCACACC
ATTGCCACCA GCGTCTACCG CAGGCTGGGC TATGACTTCC AGAAGGACCT GGCGCCCATC
ACCGTGGTGG CCGTGGTCCC CAATGTGCTG GTGGTCAATC CGCAGGTGCC CGCCAAAACC
GTGCAGGAGC TGCTGGCCCA GGCCCGCGCC CAGCCCGGCA AGCTGGCCTA TGGCTCCAAT
GGCGCGGGCA CGGGCCAGCA CCTGATCGGC GCGCAGTTCG AGTCCATGGG CGGCGTGCAG
CTGCTGCACG TGCCCTACAA GGGCAGCGGC CCGCTGACCA CGGACCTGCT GGGCGGGCAG
ATTGCCATGT CCTTCGATAC CGTCACGCCT GTGCTGCCCC ACATCAAGGC CGGCAAGCTG
CGCGCGCTGG CCGTGACTAC GGCCCGGCGC TCGGTGGCCC TGCCCGATGT GCCCACGCTG
GACGAGGCCG GGCTCAAGGG CTTCGACATG GGCACCTGGT TCGGCGTGCT GGCACCGGCC
GCCACGCCCC GCGAGGTACT GGCGCGGCTG GGCGCGGACA TGAACCGCAT CATCGAGTCC
CCGCAGTTCC GCAGGAAGAT GGAAGAGATA GGCGCCGAGC CCATCGGCGG ATCGCCCGAG
CAGATGGCGC GCCAGATTCG CGACGACACC GACCGCTTCG CCAGGCTGGT CAAGGACGCC
AAGGTGGCCC TGGATTGA
|
|---|
| Protein sequence | MNRITRVAAA CALAAAIPAT IPAAWAQAWP ARPVNLIVPF PAGGTTDVLA RALGQELSKS
LGQPVVVENR PGAGATLGAD HVAKAKPDGY TLLMGAVHHT IATSVYRRLG YDFQKDLAPI
TVVAVVPNVL VVNPQVPAKT VQELLAQARA QPGKLAYGSN GAGTGQHLIG AQFESMGGVQ
LLHVPYKGSG PLTTDLLGGQ IAMSFDTVTP VLPHIKAGKL RALAVTTARR SVALPDVPTL
DEAGLKGFDM GTWFGVLAPA ATPREVLARL GADMNRIIES PQFRRKMEEI GAEPIGGSPE
QMARQIRDDT DRFARLVKDA KVALD
|
|---|
| |