| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2037 |
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| Symbol | |
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| ID | 5747598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2229383 |
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| End bp | 2230201 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297119 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001563062 |
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| Protein GI | 160897480 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.560148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA CCCCCTCCTC CCCGGCTTGC CGCCCGCATG CGGGCCGCGT GGCCTGGATC
ACCGGCTCGA CCAGCGGCAT CGGCCTGGCC GTGGCGCGCC ATCTGGCCAG CGAGGGCGCA
GCCATCGCGC TGCATGGCCA GGCCGCCGCA TCGGCCGAGA CCGATGCGCT GGTGCGCGAG
ATCGCCCAAA CGCATGGCGT GCCGGTGCGC CACTACGGGC TGGACCTGCG CGACGGCTGC
GCCATCGCAC CGCTGGCGCA GCGCATTGCG GCCGAGATGG GCGCCATCGA CATCCTGGTC
AACAACGCAG GCATGCAGCA TGTGAGCCCG CTGCTCGAAT TCCCGGCCGG CAAGTGGGAC
GAGCTGCTGG CCGTCAACCT GTCGGCGCCC TTCCACGCCA TCCAGGCCTG CGCGCCGCAG
ATGCTGGAGC GCGGCTGGGG CCGCATCATC AATATCGCCT CGGTCAGCGG GCTGGTGGGC
GTGGCGCGCA AGCCGGCCTA TGTGGCCAGC AAGCACGGGC TGATCGGGCT GACCAAGTCG
GTGGCGCTGG AGTTCGCCAC CACGCCCGTG ACCTGCAACG CCATCTGCCC CGGCTGGGTG
CTGACGCCGC TGGTGCAACG GCAGATCGAT GCGCTGGCCG CGCGCGAGGG GCTGGATGCC
GACGCGGCGG CGCGCCAGCT GCTGGGCGCC AAGCAACCCT CCCAGGCCTT CGTGACCGTG
GAGCAGGTGG CGGCGCTGGC CGGTTTCCTG GCCAGCGAGC AGGCCGCCCA AGTGCGCGGC
GCACACTGGA ACATGGACGG CGGCTTTGCC GCTGCCTGA
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| Protein sequence | MNPTPSSPAC RPHAGRVAWI TGSTSGIGLA VARHLASEGA AIALHGQAAA SAETDALVRE
IAQTHGVPVR HYGLDLRDGC AIAPLAQRIA AEMGAIDILV NNAGMQHVSP LLEFPAGKWD
ELLAVNLSAP FHAIQACAPQ MLERGWGRII NIASVSGLVG VARKPAYVAS KHGLIGLTKS
VALEFATTPV TCNAICPGWV LTPLVQRQID ALAAREGLDA DAAARQLLGA KQPSQAFVTV
EQVAALAGFL ASEQAAQVRG AHWNMDGGFA AA
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