| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2004 |
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| Symbol | |
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| ID | 5747563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2188708 |
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| End bp | 2191224 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297084 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001563029 |
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| Protein GI | 160897447 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCG TTGTGATCGG CCACGGCATG GTGGGCCACA AATTTCTCGA GCAGCTGCAT
GCCCTGGGCG TGGCAGACGC GAACGTCACC GTGCTGTGCG AGGAGCCGCG CGCCGCCTAC
GACCGTGTTC ACCTGTCGGA ATTCTTCTCC GGCAAAAGCG CCGAGGACCT GAGCCTGGTG
GCGCCCGGCT TCTTCGAGGC CAGCGGCTTC ACGCTGCGCC TGGCGGCCAG GGCGGCAGCC
GTGGAGCGGC GCGAGCGCAC CGTGACCACG GCCGATGGCG AAATCATCCC CTACGACAGG
CTGGTGCTGG CCACAGGCTC GGCGCCCTTC GTGCCGCCCG TGCCGGGGCG CGACCGGCCG
CACTGCTTTG TCTACCGCAC CATCGAGGAT CTGGAGGCCA TGCAGGCATC GGCCGCGCGC
TCCAGGACCG GCGTGGTGGT GGGCGGCGGC CTGCTGGGCC TGGAATGCGC CAAGGCCCTG
CGCGACCTGG GCCTGGAGAC CCATGTGGTC GAGTTCGCCC CGCGCCTGAT GGCCGTGCAG
GTGGACGACG GCGGCGGCCG CGTGCTGCGC AGCAAGATCG AGGACCTGGG CGTGCAGGTG
CACACGGGCC GCAATACGCT GGAGATCACC GACGGCGCCA CGGCACGCCA CCGCATGGTG
TTTGCCGACG GCACGCACCT GGAGACCGAC ATGATCGTCT TCTCCGCCGG CATCCGCCCG
CGCGACGAGA TCGCCCGCCA ATGCGCCCTG GCCATAGGCC CGCGCGGCGG CGTGGCCGTG
GACGACCATT GCCGCACCAG CGACCGCAGC GTCTACGCCA TTGGCGAATG CGCCTCCTGG
CGCGAGCAGA CCTTCGGCCT GGTGGCACCC GGCTACGACA TGGCGCGCGT GGCGGCCCGC
CACATTGCGG GCGAGGCCGA GGCCGCCTTC GGCGGGGCCG ATCTCAGCAC CAAGCTCAAG
CTCATGGGCG TGGATGTGGC CAGCATCGGC GACGCCCAGG GCAAGACGCC GCGCAGCCGC
AACTACCAGT TCATCGACGA GCGCAAGCAG GTCTACAAGA AGATCGTGGT CAGCGAGGAC
GGCCGCCAGC TGCTGGGCGC CGTGCTGGTG GGCAATGCCG ATGAGTACGG CACGCTGCTG
CAGATGACGC TGGGCGGCAT CGCCCTGCCC GAGGAGCCCG AGTTCCTCAT CCTGCCCTCC
AGCGACGGCA AGGCCAAGCC CGGCCTGGGC GTGGACGCCC TGCCCGACAC GGCGCAGATC
TGCTCGTGCA ACAACGTCAC CAAGGCGCAG ATCTGCGTGG CCGTGGGCGA AGGCGCCTGC
ACCATGGCCG AGCTCAAGTC CTGCACCCAG GCCGGCGCCA CCTGCGGCGG CTGCGTGCCG
CTGGCCACCC AGGTCATGAA GGCCGAGATG GCCCGGCGCG GCATGGCCGT CAACAACCAT
GTCTGCGAGC ATTTCCCGCA CTCGCGCCAG GAGCTGTACC ACCTGGTGCG CGTGGGCGGC
ATCAAGACCT TCGACGAACT GCTGCACCGC CATGGCAAAG GCCTGGGCTG CGATGTCTGC
AAGCCGCTGG CCGCCAGCAT CCTGGCTTCG TGCTGGAACG AGTTCGTGCT GCAGCCGCAG
CTGGCCAGCC TGCAGGACAG CAACGACTAC TACCTGGGCA ATATCCAGAA GGACGGCAGC
TACTCCGTGG TGCCGCGCAT GCCCGGCGGC GAAGTCACGC CGGACGGCCT GATCGCCGTC
GGCCAGGTGG CCAAGAAATA CGGCCTGTAC ACCAAGCTCA CGGGCGGCGC CCGCGTGGAC
CTGTTCGGCG CGCGCGTGGA GCAGCTGCCG CTGATCTGGG AGGAGCTGAT TGCCGCCGGC
TTCGAGTCCG GCCATGCCTA CGGCAAGTCG CTGCGCACCG TCAAAAGCTG CGTGGGCTCC
ACCTGGTGCC GCTACGGCGT GGACGACAGC GTGGGCCTGG CCGTGCAGTT GGAAAACCGC
TACAAGGGCC TGCGCGCGCC GCACAAGATC AAGTTCGGCG TCTCGGGCTG CACGCGCGAA
TGCGCCGAGG CCCAGGGCAA GGACGTGGGC GTGATCGCCA CCGACAAGGG CTGGAACCTC
TACGTCTGCG GCAACGGCGG CATGAAGCCG CGCCATGCCG AGCTGATCGC CTCCGACCTG
TCCAAGGACA GGCTGCTGCA GCTCATCGAC CGCTTCCTGA TGTTCTACGT GCGCACGGCC
GACCGGCTGC AGCGCACCAG CACCTGGCGC GAAAACCTGG AAGGCGGCCT GGACTACCTC
AAGGACGTGG TGGTCAACGA CAGCCTGGGC CTGGGCGCCG AACTCGAGGC CCAGATGCAG
CATGTGGTGG ACACCTACCA GTGCGAGTGG AAGACCGCCG TCACCACGCC CGAAGTGCGC
CAGCGCTTTC GCAGCTTCAT CAACAGCGAC CAGCCCGACG AGCACATCGT CTTCGTGCAG
GAGCGCGGCC AGATCCGCCC GGCGCGCAGC GAAGAGCGCA GCGAGGCCCT GGTCTGA
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| Protein sequence | MNIVVIGHGM VGHKFLEQLH ALGVADANVT VLCEEPRAAY DRVHLSEFFS GKSAEDLSLV
APGFFEASGF TLRLAARAAA VERRERTVTT ADGEIIPYDR LVLATGSAPF VPPVPGRDRP
HCFVYRTIED LEAMQASAAR SRTGVVVGGG LLGLECAKAL RDLGLETHVV EFAPRLMAVQ
VDDGGGRVLR SKIEDLGVQV HTGRNTLEIT DGATARHRMV FADGTHLETD MIVFSAGIRP
RDEIARQCAL AIGPRGGVAV DDHCRTSDRS VYAIGECASW REQTFGLVAP GYDMARVAAR
HIAGEAEAAF GGADLSTKLK LMGVDVASIG DAQGKTPRSR NYQFIDERKQ VYKKIVVSED
GRQLLGAVLV GNADEYGTLL QMTLGGIALP EEPEFLILPS SDGKAKPGLG VDALPDTAQI
CSCNNVTKAQ ICVAVGEGAC TMAELKSCTQ AGATCGGCVP LATQVMKAEM ARRGMAVNNH
VCEHFPHSRQ ELYHLVRVGG IKTFDELLHR HGKGLGCDVC KPLAASILAS CWNEFVLQPQ
LASLQDSNDY YLGNIQKDGS YSVVPRMPGG EVTPDGLIAV GQVAKKYGLY TKLTGGARVD
LFGARVEQLP LIWEELIAAG FESGHAYGKS LRTVKSCVGS TWCRYGVDDS VGLAVQLENR
YKGLRAPHKI KFGVSGCTRE CAEAQGKDVG VIATDKGWNL YVCGNGGMKP RHAELIASDL
SKDRLLQLID RFLMFYVRTA DRLQRTSTWR ENLEGGLDYL KDVVVNDSLG LGAELEAQMQ
HVVDTYQCEW KTAVTTPEVR QRFRSFINSD QPDEHIVFVQ ERGQIRPARS EERSEALV
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